Analysis of interatomic Contacts of Structural Units in PDB entry:
6E1F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E1F entry

There are 4 chains in PDB entry 6E1F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 179TYR 267
B
 GLY 179TYR 267
C
 GLY 179TYR 267
D
 GLY 179TYR 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6E1F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
189 196Right-handed alpha
Helix 2
AA2
A
196 201Right-handed alpha
Helix 3
AA3
A
203 224Right-handed alpha
Helix 4
AA4
A
230 237Right-handed alpha
Helix 5
AA5
A
241 244Right-handed 310
Helix 6
AA6
A
245 259Right-handed alpha
Helix 7
AA7
B
179 183Right-handed 310
Helix 8
AA8
B
189 196Right-handed alpha
Helix 9
AA9
B
196 201Right-handed alpha
Helix 10
AB1
B
203 206Right-handed 310
Helix 11
AB2
B
207 224Right-handed alpha
Helix 12
AB3
B
230 238Right-handed alpha
Helix 13
AB4
B
241 244Right-handed 310
Helix 14
AB5
B
245 259Right-handed alpha
Helix 15
AB6
B
262 266Right-handed 310
Helix 16
AB7
C
189 196Right-handed alpha
Helix 17
AB8
C
196 201Right-handed alpha
Helix 18
AB9
C
203 224Right-handed alpha
Helix 19
AC1
C
230 237Right-handed alpha
Helix 20
AC2
C
241 244Right-handed 310
Helix 21
AC3
C
245 259Right-handed alpha
Helix 22
AC4
D
189 196Right-handed alpha
Helix 23
AC5
D
196 201Right-handed alpha
Helix 24
AC6
D
203 206Right-handed 310
Helix 25
AC7
D
207 224Right-handed alpha
Helix 26
AC8
D
230 238Right-handed alpha
Helix 27
AC9
D
245 259Right-handed alpha
Helix 28
AD1
D
262 266Right-handed 310
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There are no sheets in PDB entry 6E1F
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il