Analysis of interatomic Contacts of Structural Units in PDB entry:
6E1K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E1K entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 9 chains in PDB entry 6E1K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 23ILE 25
A
 HIS 27GLY 28
A
 PRO 30ARG 707
B
 GLU 23ILE 25
B
 HIS 27GLY 28
B
 PRO 30ARG 707
C
 MET 4GLN 100
D
 VAL 2VAL 120
E
 MET 4SER 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 6E1K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 41Right-handed alpha
Helix 2
AA2
A
42 45Right-handed 310
Helix 3
AA3
A
62 70Right-handed alpha
Helix 4
AA4
A
80 87Right-handed alpha
Helix 5
AA5
A
126 130Right-handed 310
Helix 6
AA6
A
131 136Right-handed alpha
Helix 7
AA7
A
137 141Right-handed 310
Helix 8
AA8
A
153 173Right-handed alpha
Helix 9
AA9
A
189 199Right-handed alpha
Helix 10
AB1
A
199 212Right-handed alpha
Helix 11
AB2
A
212 239Right-handed alpha
Helix 12
AB3
A
242 247Right-handed alpha
Helix 13
AB4
A
251 263Right-handed alpha
Helix 14
AB5
A
266 276Right-handed alpha
Helix 15
AB6
A
278 280Right-handed 310
Helix 16
AB7
A
281 295Right-handed alpha
Helix 17
AB8
A
297 325Right-handed alpha
Helix 18
AB9
A
325 330Right-handed alpha
Helix 19
AC1
A
330 335Right-handed alpha
Helix 20
AC2
A
343 355Right-handed alpha
Helix 21
AC3
A
363 371Right-handed alpha
Helix 22
AC4
A
384 399Right-handed alpha
Helix 23
AC5
A
551 565Right-handed alpha
Helix 24
AC6
A
575 587Right-handed alpha
Helix 25
AC7
A
601 606Right-handed alpha
Helix 26
AC8
A
618 629Right-handed alpha
Helix 27
AC9
A
631 643Right-handed alpha
Helix 28
AD1
A
648 662Right-handed alpha
Helix 29
AD2
A
667 676Right-handed alpha
Helix 30
AD3
A
679 692Right-handed alpha
Helix 31
AD4
A
697 704Right-handed alpha
Helix 32
AD5
B
34 42Right-handed alpha
Helix 33
AD6
B
43 45Right-handed 310
Helix 34
AD7
B
51 57Right-handed alpha
Helix 35
AD8
B
62 70Right-handed alpha
Helix 36
AD9
B
80 87Right-handed alpha
Helix 37
AE1
B
126 130Right-handed 310
Helix 38
AE2
B
152 173Right-handed alpha
Helix 39
AE3
B
189 199Right-handed alpha
Helix 40
AE4
B
199 212Right-handed alpha
Helix 41
AE5
B
212 238Right-handed alpha
Helix 42
AE6
B
241 247Right-handed alpha
Helix 43
AE7
B
251 263Right-handed alpha
Helix 44
AE8
B
266 272Right-handed alpha
Helix 45
AE9
B
278 280Right-handed 310
Helix 46
AF1
B
281 295Right-handed alpha
Helix 47
AF2
B
297 330Right-handed alpha
Helix 48
AF3
B
330 335Right-handed alpha
Helix 49
AF4
B
343 350Right-handed alpha
Helix 50
AF5
B
350 355Right-handed alpha
Helix 51
AF6
B
360 371Right-handed alpha
Helix 52
AF7
B
384 392Right-handed alpha
Helix 53
AF8
B
394 399Right-handed alpha
Helix 54
AF9
B
551 565Right-handed alpha
Helix 55
AG1
B
578 587Right-handed alpha
Helix 56
AG2
B
597 600Right-handed 310
Helix 57
AG3
B
601 606Right-handed alpha
Helix 58
AG4
B
618 629Right-handed alpha
Helix 59
AG5
B
632 643Right-handed alpha
Helix 60
AG6
B
648 663Right-handed alpha
Helix 61
AG7
B
667 676Right-handed alpha
Helix 62
AG8
B
679 691Right-handed alpha
Helix 63
AG9
B
697 707Right-handed alpha
Helix 64
AH1
C
50 52Right-handed 310
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There are 8 sheets in PDB entry 6E1K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
21 24first strand
Strand 2
C
70 75anti-parallel
Strand 3
C
62 67anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 54first strand
Strand 2
C
45 49anti-parallel
Strand 3
C
34 37anti-parallel
Strand 4
C
88 89anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
5 7first strand
Strand 2
D
19 23anti-parallel
Strand 3
D
81 82anti-parallel
Strand 4
D
69 70anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 50first strand
Strand 2
D
35 38anti-parallel
Strand 3
D
94 95anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
21 24first strand
Strand 2
E
70 75anti-parallel
Strand 3
E
62 67anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
53 54first strand
Strand 2
E
45 49anti-parallel
Strand 3
E
34 37anti-parallel
Strand 4
E
88 89anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
5 7first strand
Strand 2
F
19 23anti-parallel
Strand 3
F
81 82anti-parallel
Strand 4
F
69 70anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
46 50first strand
Strand 2
F
35 38anti-parallel
Strand 3
F
94 95anti-parallel
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