Analysis of interatomic Contacts of Structural Units in PDB entry:
6E1M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E1M entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 6 chains in PDB entry 6E1M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 23ILE 25
A
 HIS 27GLY 28
A
 PRO 30ARG 707
B
 GLU 23ILE 25
B
 HIS 27GLY 28
B
 PRO 30ARG 707
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 6E1M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 44Right-handed alpha
Helix 2
AA2
A
51 56Right-handed alpha
Helix 3
AA3
A
62 74Right-handed alpha
Helix 4
AA4
A
74 87Right-handed alpha
Helix 5
AA5
A
88 92Right-handed 310
Helix 6
AA6
A
117 136Right-handed alpha
Helix 7
AA7
A
137 142Right-handed 310
Helix 8
AA8
A
143 148Right-handed alpha
Helix 9
AA9
A
153 173Right-handed alpha
Helix 10
AB1
A
189 199Right-handed alpha
Helix 11
AB2
A
199 212Right-handed alpha
Helix 12
AB3
A
212 237Right-handed alpha
Helix 13
AB4
A
241 247Right-handed alpha
Helix 14
AB5
A
251 263Right-handed alpha
Helix 15
AB6
A
266 271Right-handed alpha
Helix 16
AB7
A
271 276Right-handed alpha
Helix 17
AB8
A
278 280Right-handed 310
Helix 18
AB9
A
281 295Right-handed alpha
Helix 19
AC1
A
295 335Right-handed alpha
Helix 20
AC2
A
344 355Right-handed alpha
Helix 21
AC3
A
360 371Right-handed alpha
Helix 22
AC4
A
384 399Right-handed alpha
Helix 23
AC5
A
551 565Right-handed alpha
Helix 24
AC6
A
569 587Right-handed alpha
Helix 25
AC7
A
597 600Right-handed 310
Helix 26
AC8
A
601 606Right-handed alpha
Helix 27
AC9
A
615 629Right-handed alpha
Helix 28
AD1
A
632 643Right-handed alpha
Helix 29
AD2
A
648 662Right-handed alpha
Helix 30
AD3
A
667 684Right-handed alpha
Helix 31
AD4
A
684 692Right-handed alpha
Helix 32
AD5
A
697 704Right-handed alpha
Helix 33
AD6
B
34 47Right-handed alpha
Helix 34
AD7
B
51 56Right-handed alpha
Helix 35
AD8
B
62 74Right-handed alpha
Helix 36
AD9
B
74 87Right-handed alpha
Helix 37
AE1
B
88 92Right-handed 310
Helix 38
AE2
B
117 136Right-handed alpha
Helix 39
AE3
B
137 142Right-handed 310
Helix 40
AE4
B
143 148Right-handed alpha
Helix 41
AE5
B
154 173Right-handed alpha
Helix 42
AE6
B
189 199Right-handed alpha
Helix 43
AE7
B
199 212Right-handed alpha
Helix 44
AE8
B
212 237Right-handed alpha
Helix 45
AE9
B
241 247Right-handed alpha
Helix 46
AF1
B
251 263Right-handed alpha
Helix 47
AF2
B
266 271Right-handed alpha
Helix 48
AF3
B
278 280Right-handed 310
Helix 49
AF4
B
281 295Right-handed alpha
Helix 50
AF5
B
295 335Right-handed alpha
Helix 51
AF6
B
343 354Right-handed alpha
Helix 52
AF7
B
360 371Right-handed alpha
Helix 53
AF8
B
384 399Right-handed alpha
Helix 54
AF9
B
551 565Right-handed alpha
Helix 55
AG1
B
569 587Right-handed alpha
Helix 56
AG2
B
597 600Right-handed 310
Helix 57
AG3
B
601 606Right-handed alpha
Helix 58
AG4
B
615 629Right-handed alpha
Helix 59
AG5
B
632 643Right-handed alpha
Helix 60
AG6
B
645 647Right-handed 310
Helix 61
AG7
B
648 660Right-handed alpha
Helix 62
AG8
B
667 684Right-handed alpha
Helix 63
AG9
B
686 691Right-handed alpha
Helix 64
AH1
B
697 702Right-handed alpha
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There are no sheets in PDB entry 6E1M
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