Analysis of interatomic Contacts of Structural Units in PDB entry:
6E1Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E1Q entry

There is 1 chain in PDB entry 6E1Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 587
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6E1Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 23Right-handed alpha
Helix 2
AA2
A
23 39Right-handed alpha
Helix 3
AA3
A
42 50Right-handed alpha
Helix 4
AA4
A
54 62Right-handed alpha
Helix 5
AA5
A
66 79Right-handed alpha
Helix 6
AA6
A
82 86Right-handed 310
Helix 7
AA7
A
112 133Right-handed alpha
Helix 8
AA8
A
135 139Right-handed 310
Helix 9
AA9
A
161 173Right-handed alpha
Helix 10
AB1
A
193 208Right-handed alpha
Helix 11
AB2
A
220 244Right-handed alpha
Helix 12
AB3
A
252 259Right-handed alpha
Helix 13
AB4
A
260 262Right-handed 310
Helix 14
AB5
A
267 279Right-handed alpha
Helix 15
AB6
A
285 291Right-handed alpha
Helix 16
AB7
A
302 307Right-handed 310
Helix 17
AB8
A
308 317Right-handed alpha
Helix 18
AB9
A
342 346Right-handed 310
Helix 19
AC1
A
383 385Right-handed 310
Helix 20
AC2
A
441 453Right-handed alpha
Helix 21
AC3
A
454 459Right-handed 310
Helix 22
AC4
A
496 511Right-handed alpha
Helix 23
AC5
A
512 521Right-handed alpha
Helix 24
AC6
A
536 548Right-handed alpha
Helix 25
AC7
A
563 572Right-handed alpha
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There are 6 sheets in PDB entry 6E1Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 111first strand
Strand 2
A
91 100anti-parallel
Strand 3
A
158 160parallel
Strand 4
A
151 152anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 183first strand
Strand 2
A
140 143parallel
Strand 3
A
212 219parallel
Strand 4
A
297 300parallel
Strand 5
A
321 322parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 327first strand
Strand 2
A
332 335anti-parallel
Strand 3
A
348 350anti-parallel
Strand 4
A
419 427anti-parallel
Strand 5
A
408 416anti-parallel
Strand 6
A
390 396anti-parallel
Strand 7
A
356 361anti-parallel
Strand 8
A
379 381anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 327first strand
Strand 2
A
332 335anti-parallel
Strand 3
A
348 350anti-parallel
Strand 4
A
419 427anti-parallel
Strand 5
A
408 416anti-parallel
Strand 6
A
390 396anti-parallel
Strand 7
A
404 405anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
430 432first strand
Strand 2
A
439 440anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 470first strand
Strand 2
A
477 485anti-parallel
Strand 3
A
529 533parallel
Strand 4
A
574 579anti-parallel
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