Analysis of interatomic Contacts of Structural Units in PDB entry:
6E2F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6E2F entry

There are 5 chains in PDB entry 6E2F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 28	ASN 640
B	SER 28	ARG 646
C	SER 28	ARG 705
D	SER 28	ASN 640
E	ALA 1	LYS 148

There are135 helices in PDB entry 6E2F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	47	Right-handed alpha
Helix 2	AA2	A	47	55	Right-handed alpha
Helix 3	AA3	A	57	68	Right-handed alpha
Helix 4	AA4	A	81	89	Right-handed alpha
Helix 5	AA5	A	91	102	Right-handed alpha
Helix 6	AA6	A	119	127	Right-handed alpha
Helix 7	AA7	A	131	139	Right-handed alpha
Helix 8	AA8	A	149	153	Right-handed 310
Helix 9	AA9	A	165	173	Right-handed alpha
Helix 10	AB1	A	175	184	Right-handed alpha
Helix 11	AB2	A	198	205	Right-handed alpha
Helix 12	AB3	A	209	211	Right-handed 310
Helix 13	AB4	A	212	222	Right-handed alpha
Helix 14	AB5	A	242	251	Right-handed alpha
Helix 15	AB6	A	252	261	Right-handed alpha
Helix 16	AB7	A	292	298	Right-handed alpha
Helix 17	AB8	A	302	309	Right-handed 310
Helix 18	AB9	A	310	323	Right-handed alpha
Helix 19	AC1	A	325	349	Right-handed alpha
Helix 20	AC2	A	380	408	Right-handed alpha
Helix 21	AC3	A	412	423	Right-handed alpha
Helix 22	AC4	A	427	446	Right-handed alpha
Helix 23	AC5	A	450	464	Right-handed alpha
Helix 24	AC6	A	465	470	Right-handed 310
Helix 25	AC7	A	477	487	Right-handed alpha
Helix 26	AC8	A	490	512	Right-handed alpha
Helix 27	AC9	A	520	524	Right-handed 310
Helix 28	AD1	A	525	537	Right-handed alpha
Helix 29	AD2	A	554	567	Right-handed alpha
Helix 30	AD3	A	569	581	Right-handed alpha
Helix 31	AD4	A	589	607	Right-handed alpha
Helix 32	AD5	B	30	47	Right-handed alpha
Helix 33	AD6	B	47	55	Right-handed alpha
Helix 34	AD7	B	57	68	Right-handed alpha
Helix 35	AD8	B	81	89	Right-handed alpha
Helix 36	AD9	B	91	102	Right-handed alpha
Helix 37	AE1	B	104	108	Right-handed 310
Helix 38	AE2	B	119	127	Right-handed alpha
Helix 39	AE3	B	131	139	Right-handed alpha
Helix 40	AE4	B	149	153	Right-handed 310
Helix 41	AE5	B	165	173	Right-handed alpha
Helix 42	AE6	B	175	184	Right-handed alpha
Helix 43	AE7	B	198	205	Right-handed alpha
Helix 44	AE8	B	209	221	Right-handed alpha
Helix 45	AE9	B	242	251	Right-handed alpha
Helix 46	AF1	B	252	261	Right-handed alpha
Helix 47	AF2	B	292	298	Right-handed alpha
Helix 48	AF3	B	302	309	Right-handed 310
Helix 49	AF4	B	310	323	Right-handed alpha
Helix 50	AF5	B	325	349	Right-handed alpha
Helix 51	AF6	B	379	404	Right-handed alpha
Helix 52	AF7	B	412	420	Right-handed alpha
Helix 53	AF8	B	427	446	Right-handed alpha
Helix 54	AF9	B	450	464	Right-handed alpha
Helix 55	AG1	B	465	471	Right-handed 310
Helix 56	AG2	B	477	487	Right-handed alpha
Helix 57	AG3	B	490	512	Right-handed alpha
Helix 58	AG4	B	520	524	Right-handed 310
Helix 59	AG5	B	525	538	Right-handed alpha
Helix 60	AG6	B	554	567	Right-handed alpha
Helix 61	AG7	B	569	582	Right-handed alpha
Helix 62	AG8	B	586	607	Right-handed alpha
Helix 63	AG9	B	639	645	Right-handed alpha
Helix 64	AH1	C	29	47	Right-handed alpha
Helix 65	AH2	C	47	55	Right-handed alpha
Helix 66	AH3	C	57	68	Right-handed alpha
Helix 67	AH4	C	81	89	Right-handed alpha
Helix 68	AH5	C	91	102	Right-handed alpha
Helix 69	AH6	C	104	108	Right-handed 310
Helix 70	AH7	C	119	127	Right-handed alpha
Helix 71	AH8	C	132	139	Right-handed alpha
Helix 72	AH9	C	165	173	Right-handed alpha
Helix 73	AI1	C	175	184	Right-handed alpha
Helix 74	AI2	C	198	205	Right-handed alpha
Helix 75	AI3	C	209	211	Right-handed 310
Helix 76	AI4	C	212	221	Right-handed alpha
Helix 77	AI5	C	242	251	Right-handed alpha
Helix 78	AI6	C	252	261	Right-handed alpha
Helix 79	AI7	C	292	298	Right-handed alpha
Helix 80	AI8	C	302	309	Right-handed 310
Helix 81	AI9	C	310	323	Right-handed alpha
Helix 82	AJ1	C	325	349	Right-handed alpha
Helix 83	AJ2	C	380	403	Right-handed alpha
Helix 84	AJ3	C	403	410	Right-handed alpha
Helix 85	AJ4	C	412	423	Right-handed alpha
Helix 86	AJ5	C	427	446	Right-handed alpha
Helix 87	AJ6	C	450	464	Right-handed alpha
Helix 88	AJ7	C	465	470	Right-handed 310
Helix 89	AJ8	C	477	487	Right-handed alpha
Helix 90	AJ9	C	488	512	Right-handed alpha
Helix 91	AK1	C	525	538	Right-handed alpha
Helix 92	AK2	C	554	567	Right-handed alpha
Helix 93	AK3	C	569	584	Right-handed alpha
Helix 94	AK4	C	586	607	Right-handed alpha
Helix 95	AK5	C	640	652	Right-handed alpha
Helix 96	AK6	C	687	703	Right-handed alpha
Helix 97	AK7	D	30	47	Right-handed alpha
Helix 98	AK8	D	47	55	Right-handed alpha
Helix 99	AK9	D	57	66	Right-handed alpha
Helix 100	AL1	D	81	89	Right-handed alpha
Helix 101	AL2	D	91	102	Right-handed alpha
Helix 102	AL3	D	119	127	Right-handed alpha
Helix 103	AL4	D	132	139	Right-handed alpha
Helix 104	AL5	D	149	153	Right-handed 310
Helix 105	AL6	D	165	173	Right-handed alpha
Helix 106	AL7	D	175	184	Right-handed alpha
Helix 107	AL8	D	198	205	Right-handed alpha
Helix 108	AL9	D	209	211	Right-handed 310
Helix 109	AM1	D	212	222	Right-handed alpha
Helix 110	AM2	D	242	251	Right-handed alpha
Helix 111	AM3	D	252	261	Right-handed alpha
Helix 112	AM4	D	292	298	Right-handed alpha
Helix 113	AM5	D	302	310	Right-handed 310
Helix 114	AM6	D	313	323	Right-handed alpha
Helix 115	AM7	D	325	346	Right-handed alpha
Helix 116	AM8	D	379	408	Right-handed alpha
Helix 117	AM9	D	412	423	Right-handed alpha
Helix 118	AN1	D	427	445	Right-handed alpha
Helix 119	AN2	D	450	465	Right-handed alpha
Helix 120	AN3	D	466	471	Right-handed 310
Helix 121	AN4	D	477	487	Right-handed alpha
Helix 122	AN5	D	488	512	Right-handed alpha
Helix 123	AN6	D	520	524	Right-handed 310
Helix 124	AN7	D	525	538	Right-handed alpha
Helix 125	AN8	D	552	567	Right-handed alpha
Helix 126	AN9	D	569	584	Right-handed alpha
Helix 127	AO1	D	586	607	Right-handed alpha
Helix 128	AO2	E	5	20	Right-handed alpha
Helix 129	AO3	E	28	39	Right-handed alpha
Helix 130	AO4	E	46	56	Right-handed alpha
Helix 131	AO5	E	64	75	Right-handed alpha
Helix 132	AO6	E	83	93	Right-handed alpha
Helix 133	AO7	E	101	113	Right-handed alpha
Helix 134	AO8	E	117	129	Right-handed alpha
Helix 135	AO9	E	137	146	Right-handed alpha

There are 4 sheets in PDB entry 6E2F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	270	first strand
Strand 2	A	273	278	anti-parallel
Strand 3	A	631	636	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	270	first strand
Strand 2	B	273	278	anti-parallel
Strand 3	B	631	636	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	269	270	first strand
Strand 2	C	273	278	anti-parallel
Strand 3	C	631	636	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	269	270	first strand
Strand 2	D	273	278	anti-parallel
Strand 3	D	631	636	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6E2F

Analysis of interatomic Contacts of Structural Units in PDB entry:
6E2F