Analysis of interatomic Contacts of Structural Units in PDB entry:
6E2V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E2V entry

There is 1 chain in PDB entry 6E2V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0THR 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6E2V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 84Right-handed alpha
Helix 2
AA2
A
104 121Right-handed alpha
Helix 3
AA3
A
126 138Right-handed alpha
Helix 4
AA4
A
139 144Right-handed 310
Helix 5
AA5
A
170 173Right-handed 310
Helix 6
AA6
A
190 202Right-handed alpha
Helix 7
AA7
A
204 225Right-handed alpha
Helix 8
AA8
A
227 245Right-handed alpha
Helix 9
AA9
A
246 249Right-handed 310
Helix 10
AB1
A
257 273Right-handed alpha
Helix 11
AB2
A
295 304Right-handed alpha
Helix 12
AB3
A
308 310Right-handed 310
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There are 4 sheets in PDB entry 6E2V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 63first strand
Strand 2
A
56 59anti-parallel
Strand 3
A
89 96parallel
Strand 4
A
32 49anti-parallel
Strand 5
A
149 153anti-parallel
Strand 6
A
162 165anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 63first strand
Strand 2
A
56 59anti-parallel
Strand 3
A
89 96parallel
Strand 4
A
32 49anti-parallel
Strand 5
A
1 15anti-parallel
Strand 6
A
322 324anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 22first strand
Strand 2
A
27 28anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 280first strand
Strand 2
A
287 292anti-parallel
Strand 3
A
175 180anti-parallel
Strand 4
A
312 316anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il