Analysis of interatomic Contacts of Structural Units in PDB entry:
6E3F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E3F entry

There is 1 chain in PDB entry 6E3F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 751GLN 1247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6E3F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
814 822Right-handed alpha
Helix 2
AA2
A
841 850Right-handed alpha
Helix 3
AA3
A
945 949Right-handed 310
Helix 4
AA4
A
954 959Right-handed alpha
Helix 5
AA5
A
977 980Right-handed 310
Helix 6
AA6
A
1005 1016Right-handed alpha
Helix 7
AA7
A
1030 1038Right-handed alpha
Helix 8
AA8
A
1055 1061Right-handed alpha
Helix 9
AA9
A
1177 1179Right-handed 310
Helix 10
AB1
A
1197 1203Right-handed alpha
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There are 10 sheets in PDB entry 6E3F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
759 764first strand
Strand 2
A
781 788anti-parallel
Strand 3
A
862 867anti-parallel
Strand 4
A
811 813anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
825 830first strand
Strand 2
A
835 840anti-parallel
Strand 3
A
801 806anti-parallel
Strand 4
A
879 882anti-parallel
Strand 5
A
887 889anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
873 876first strand
Strand 2
A
893 896anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
915 917first strand
Strand 2
A
936 943anti-parallel
Strand 3
A
1045 1053anti-parallel
Strand 4
A
973 975anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
915 917first strand
Strand 2
A
936 943anti-parallel
Strand 3
A
1045 1053anti-parallel
Strand 4
A
981 984anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
993 998first strand
Strand 2
A
1023 1028anti-parallel
Strand 3
A
962 967anti-parallel
Strand 4
A
1062 1072anti-parallel
Strand 5
A
1075 1078anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
993 998first strand
Strand 2
A
1023 1028anti-parallel
Strand 3
A
962 967anti-parallel
Strand 4
A
1062 1072anti-parallel
Strand 5
A
1082 1086anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1149 1159first strand
Strand 2
A
1212 1220anti-parallel
Strand 3
A
1117 1123anti-parallel
Strand 4
A
1092 1096anti-parallel
Strand 5
A
1242 1243parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1181 1186first strand
Strand 2
A
1191 1196anti-parallel
Strand 3
A
1138 1144anti-parallel
Strand 4
A
1228 1234anti-parallel
Strand 5
A
1237 1240anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1163 1164first strand
Strand 2
A
1170 1171anti-parallel
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