Analysis of interatomic Contacts of Structural Units in PDB entry:
6E4Q

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6E4Q entry

There are 3 chains in PDB entry 6E4Q (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 143	LEU 650
B	GLY 143	LEU 650
C	GLY 143	HIS 372

There are 86 helices in PDB entry 6E4Q. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	147	151	Right-handed 310
Helix 2	AA2	A	160	175	Right-handed alpha
Helix 3	AA3	A	177	184	Right-handed alpha
Helix 4	AA4	A	195	201	Right-handed alpha
Helix 5	AA5	A	221	236	Right-handed alpha
Helix 6	AA6	A	237	239	Right-handed 310
Helix 7	AA7	A	253	256	Right-handed 310
Helix 8	AA8	A	257	264	Right-handed alpha
Helix 9	AA9	A	279	291	Right-handed alpha
Helix 10	AB1	A	310	321	Right-handed alpha
Helix 11	AB2	A	344	347	Right-handed 310
Helix 12	AB3	A	365	370	Right-handed alpha
Helix 13	AB4	A	393	399	Right-handed alpha
Helix 14	AB5	A	411	423	Right-handed alpha
Helix 15	AB6	A	454	466	Right-handed alpha
Helix 16	AB7	A	469	477	Right-handed alpha
Helix 17	AB8	A	487	497	Right-handed alpha
Helix 18	AB9	A	501	509	Right-handed alpha
Helix 19	AC1	A	515	519	Right-handed 310
Helix 20	AC2	A	558	562	Right-handed 310
Helix 21	AC3	A	594	597	Right-handed 310
Helix 22	AC4	A	635	638	Right-handed 310
Helix 23	AC5	A	646	650	Right-handed 310
Helix 24	AC6	B	147	151	Right-handed 310
Helix 25	AC7	B	160	175	Right-handed alpha
Helix 26	AC8	B	177	184	Right-handed alpha
Helix 27	AC9	B	195	201	Right-handed alpha
Helix 28	AD1	B	221	236	Right-handed alpha
Helix 29	AD2	B	237	239	Right-handed 310
Helix 30	AD3	B	253	256	Right-handed 310
Helix 31	AD4	B	257	264	Right-handed alpha
Helix 32	AD5	B	280	292	Right-handed alpha
Helix 33	AD6	B	310	321	Right-handed alpha
Helix 34	AD7	B	365	370	Right-handed alpha
Helix 35	AD8	B	393	399	Right-handed alpha
Helix 36	AD9	B	411	423	Right-handed alpha
Helix 37	AE1	B	454	466	Right-handed alpha
Helix 38	AE2	B	469	477	Right-handed alpha
Helix 39	AE3	B	487	498	Right-handed alpha
Helix 40	AE4	B	501	509	Right-handed alpha
Helix 41	AE5	B	515	519	Right-handed 310
Helix 42	AE6	B	594	597	Right-handed 310
Helix 43	AE7	B	635	638	Right-handed 310
Helix 44	AE8	B	646	650	Right-handed 310
Helix 45	AE9	C	147	151	Right-handed 310
Helix 46	AF1	C	160	175	Right-handed alpha
Helix 47	AF2	C	177	184	Right-handed alpha
Helix 48	AF3	C	195	201	Right-handed alpha
Helix 49	AF4	C	221	236	Right-handed alpha
Helix 50	AF5	C	237	239	Right-handed 310
Helix 51	AF6	C	253	256	Right-handed 310
Helix 52	AF7	C	257	264	Right-handed alpha
Helix 53	AF8	C	279	292	Right-handed alpha
Helix 54	AF9	C	310	321	Right-handed alpha
Helix 55	AG1	C	365	370	Right-handed alpha
Helix 56	AG2	C	393	399	Right-handed alpha
Helix 57	AG3	C	411	423	Right-handed alpha
Helix 58	AG4	C	454	466	Right-handed alpha
Helix 59	AG5	C	469	477	Right-handed alpha
Helix 60	AG6	C	487	498	Right-handed alpha
Helix 61	AG7	C	501	509	Right-handed alpha
Helix 62	AG8	C	515	519	Right-handed 310
Helix 63	AG9	C	594	597	Right-handed 310
Helix 64	AH1	C	635	638	Right-handed 310
Helix 65	AH2	C	646	650	Right-handed 310
Helix 66	AH3	D	147	151	Right-handed 310
Helix 67	AH4	D	160	175	Right-handed alpha
Helix 68	AH5	D	177	184	Right-handed alpha
Helix 69	AH6	D	195	201	Right-handed alpha
Helix 70	AH7	D	221	236	Right-handed alpha
Helix 71	AH8	D	237	239	Right-handed 310
Helix 72	AH9	D	253	256	Right-handed 310
Helix 73	AI1	D	257	264	Right-handed alpha
Helix 74	AI2	D	265	267	Right-handed 310
Helix 75	AI3	D	279	292	Right-handed alpha
Helix 76	AI4	D	310	321	Right-handed alpha
Helix 77	AI5	D	365	370	Right-handed alpha
Helix 78	AI6	D	393	399	Right-handed alpha
Helix 79	AI7	D	411	423	Right-handed alpha
Helix 80	AI8	D	454	466	Right-handed alpha
Helix 81	AI9	D	469	477	Right-handed alpha
Helix 82	AJ1	D	487	498	Right-handed alpha
Helix 83	AJ2	D	501	509	Right-handed alpha
Helix 84	AJ3	D	515	519	Right-handed 310
Helix 85	AJ4	D	635	638	Right-handed 310
Helix 86	AJ5	D	646	650	Right-handed 310

There are 32 sheets in PDB entry 6E4Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	270	273	first strand
Strand 2	A	241	247	parallel
Strand 3	A	211	216	parallel
Strand 4	A	296	299	parallel
Strand 5	A	389	392	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	306	first strand
Strand 2	A	426	438	anti-parallel
Strand 3	A	324	333	parallel
Strand 4	A	340	341	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	306	first strand
Strand 2	A	426	438	anti-parallel
Strand 3	A	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	349	354	first strand
Strand 2	A	358	363	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	521	523	first strand
Strand 2	A	563	565	anti-parallel
Strand 3	A	571	573	anti-parallel
Strand 4	A	576	580	anti-parallel
Strand 5	A	585	589	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	550	553	first strand
Strand 2	A	534	537	anti-parallel
Strand 3	A	525	527	anti-parallel
Strand 4	A	640	642	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	599	602	first strand
Strand 2	A	607	610	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	616	619	first strand
Strand 2	A	626	629	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	273	first strand
Strand 2	B	241	247	parallel
Strand 3	B	211	216	parallel
Strand 4	B	296	300	parallel
Strand 5	B	389	392	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	306	first strand
Strand 2	B	426	438	anti-parallel
Strand 3	B	324	333	parallel
Strand 4	B	340	341	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	306	first strand
Strand 2	B	426	438	anti-parallel
Strand 3	B	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	349	354	first strand
Strand 2	B	358	363	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	521	523	first strand
Strand 2	B	563	565	anti-parallel
Strand 3	B	571	573	anti-parallel
Strand 4	B	576	580	anti-parallel
Strand 5	B	585	589	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	551	553	first strand
Strand 2	B	534	536	anti-parallel
Strand 3	B	525	527	anti-parallel
Strand 4	B	640	642	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	599	602	first strand
Strand 2	B	607	610	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	616	619	first strand
Strand 2	B	626	629	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	270	273	first strand
Strand 2	C	241	247	parallel
Strand 3	C	211	216	parallel
Strand 4	C	296	300	parallel
Strand 5	C	389	392	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	304	306	first strand
Strand 2	C	426	438	anti-parallel
Strand 3	C	324	333	parallel
Strand 4	C	340	341	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	304	306	first strand
Strand 2	C	426	438	anti-parallel
Strand 3	C	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	349	354	first strand
Strand 2	C	358	363	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	521	523	first strand
Strand 2	C	563	565	anti-parallel
Strand 3	C	571	573	anti-parallel
Strand 4	C	576	580	anti-parallel
Strand 5	C	585	589	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	550	553	first strand
Strand 2	C	534	537	anti-parallel
Strand 3	C	525	527	anti-parallel
Strand 4	C	640	642	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	599	601	first strand
Strand 2	C	608	610	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	616	619	first strand
Strand 2	C	626	629	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	270	273	first strand
Strand 2	D	241	247	parallel
Strand 3	D	211	216	parallel
Strand 4	D	296	300	parallel
Strand 5	D	389	392	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	304	306	first strand
Strand 2	D	426	438	anti-parallel
Strand 3	D	324	333	parallel
Strand 4	D	340	341	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	304	306	first strand
Strand 2	D	426	438	anti-parallel
Strand 3	D	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	349	354	first strand
Strand 2	D	358	363	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	521	523	first strand
Strand 2	D	563	565	anti-parallel
Strand 3	D	571	573	anti-parallel
Strand 4	D	576	580	anti-parallel
Strand 5	D	585	589	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	550	553	first strand
Strand 2	D	534	537	anti-parallel
Strand 3	D	525	527	anti-parallel
Strand 4	D	640	642	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	599	602	first strand
Strand 2	D	607	610	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	616	619	first strand
Strand 2	D	626	629	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6E4Q

Analysis of interatomic Contacts of Structural Units in PDB entry:
6E4Q