Analysis of interatomic Contacts of Structural Units in PDB entry:
6E4V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E4V entry

There is 1 chain in PDB entry 6E4V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 58PHE 729
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6E4V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 78Right-handed 310
Helix 2
AA2
A
86 94Right-handed alpha
Helix 3
AA3
A
97 104Right-handed alpha
Helix 4
AA4
A
146 150Right-handed 310
Helix 5
AA5
A
151 153Right-handed 310
Helix 6
AA6
A
357 365Right-handed 310
Helix 7
AA7
A
420 425Right-handed alpha
Helix 8
AA8
A
426 430Right-handed 310
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There are 6 sheets in PDB entry 6E4V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 85first strand
Strand 2
A
155 162anti-parallel
Strand 3
A
176 182anti-parallel
Strand 4
A
129 132parallel
Strand 5
A
135 138anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 114first strand
Strand 2
A
117 122anti-parallel
Strand 3
A
125 126anti-parallel
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There are 23 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 199first strand
Strand 2
A
203 213anti-parallel
Strand 3
A
220 232anti-parallel
Strand 4
A
239 253anti-parallel
Strand 5
A
257 271anti-parallel
Strand 6
A
302 319anti-parallel
Strand 7
A
322 342anti-parallel
Strand 8
A
368 392anti-parallel
Strand 9
A
395 419anti-parallel
Strand 10
A
443 464anti-parallel
Strand 11
A
467 481anti-parallel
Strand 12
A
486 501anti-parallel
Strand 13
A
506 517anti-parallel
Strand 14
A
532 545anti-parallel
Strand 15
A
550 562anti-parallel
Strand 16
A
588 601anti-parallel
Strand 17
A
604 616anti-parallel
Strand 18
A
630 639anti-parallel
Strand 19
A
646 655anti-parallel
Strand 20
A
676 686anti-parallel
Strand 21
A
691 698anti-parallel
Strand 22
A
720 728anti-parallel
Strand 23
A
191 199anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 346first strand
Strand 2
A
353 354anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
564 571first strand
Strand 2
A
579 584anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
658 664first strand
Strand 2
A
667 673anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il