Analysis of interatomic Contacts of Structural Units in PDB entry:
6E59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E59 entry

There is 1 chain in PDB entry 6E59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 28PHE 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 6E59. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 60Right-handed alpha
Helix 2
AA2
A
65 79Right-handed alpha
Helix 3
AA3
A
81 94Right-handed alpha
Helix 4
AA4
A
103 136Right-handed alpha
Helix 5
AA5
A
143 167Right-handed alpha
Helix 6
AA6
A
188 205Right-handed alpha
Helix 7
AA7
A
205 225Right-handed alpha
Helix 8
AA8
A
1008 1012Right-handed 310
Helix 9
AA9
A
1015 1027Right-handed alpha
Helix 10
AB1
A
1047 1060Right-handed alpha
Helix 11
AB2
A
1061 1065Right-handed 310
Helix 12
AB3
A
1076 1090Right-handed alpha
Helix 13
AB4
A
1101 1110Right-handed alpha
Helix 14
AB5
A
1125 1134Right-handed alpha
Helix 15
AB6
A
1144 1150Right-handed alpha
Helix 16
AB7
A
1162 1177Right-handed alpha
Helix 17
AB8
A
1181 261Right-handed alpha
Helix 18
AB9
A
261 270Right-handed alpha
Helix 19
AC1
A
283 297Right-handed alpha
Helix 20
AC2
A
300 309Right-handed alpha
Helix 21
AC3
A
309 319Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6E59. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 173first strand
Strand 2
A
178 181anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1093 1096first strand
Strand 2
A
1067 1072parallel
Strand 3
A
1033 1038parallel
Strand 4
A
1114 1117parallel
Strand 5
A
1137 1141parallel
Strand 6
A
1156 1158parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il