Analysis of interatomic Contacts of Structural Units in PDB entry:
6E5R

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6E5R entry

There are 2 chains in PDB entry 6E5R (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 1	LYS 133
B	THR 1	LYS 133

There are 4 helices in PDB entry 6E5R. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	23	Right-handed alpha
Helix 2	AA2	A	26	34	Right-handed alpha
Helix 3	AA3	B	15	23	Right-handed alpha
Helix 4	AA4	B	26	34	Right-handed alpha

There is 1 sheet (AA1) in PDB entry 6E5R.

There are 18 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	73	first strand
Strand 2	A	81	89	anti-parallel
Strand 3	A	92	98	anti-parallel
Strand 4	A	104	110	anti-parallel
Strand 5	A	114	121	anti-parallel
Strand 6	A	124	132	anti-parallel
Strand 7	B	6	14	anti-parallel
Strand 8	B	38	45	anti-parallel
Strand 9	B	48	65	anti-parallel
Strand 10	A	48	65	anti-parallel
Strand 11	A	38	42	anti-parallel
Strand 12	A	6	14	anti-parallel
Strand 13	B	124	132	anti-parallel
Strand 14	B	114	121	anti-parallel
Strand 15	B	105	111	anti-parallel
Strand 16	B	92	98	anti-parallel
Strand 17	B	81	89	anti-parallel
Strand 18	B	70	73	anti-parallel

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6E5R

Analysis of interatomic Contacts of Structural Units in PDB entry:
6E5R