Analysis of interatomic Contacts of Structural Units in PDB entry:
6E60


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E60 entry

There is 1 chain in PDB entry 6E60 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 21ASN 558
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6E60. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 30Right-handed alpha
Helix 2
AA2
A
40 55Right-handed alpha
Helix 3
AA3
A
55 65Right-handed alpha
Helix 4
AA4
A
65 70Right-handed alpha
Helix 5
AA5
A
76 82Right-handed alpha
Helix 6
AA6
A
89 94Right-handed alpha
Helix 7
AA7
A
94 103Right-handed alpha
Helix 8
AA8
A
103 116Right-handed alpha
Helix 9
AA9
A
118 120Right-handed 310
Helix 10
AB1
A
121 144Right-handed alpha
Helix 11
AB2
A
153 158Right-handed alpha
Helix 12
AB3
A
166 185Right-handed alpha
Helix 13
AB4
A
201 220Right-handed alpha
Helix 14
AB5
A
224 237Right-handed alpha
Helix 15
AB6
A
245 249Right-handed 310
Helix 16
AB7
A
262 268Right-handed 310
Helix 17
AB8
A
272 280Right-handed alpha
Helix 18
AB9
A
291 301Right-handed alpha
Helix 19
AC1
A
305 309Right-handed alpha
Helix 20
AC2
A
329 337Right-handed alpha
Helix 21
AC3
A
359 367Right-handed alpha
Helix 22
AC4
A
377 381Right-handed 310
Helix 23
AC5
A
386 389Right-handed 310
Helix 24
AC6
A
399 413Right-handed alpha
Helix 25
AC7
A
421 442Right-handed alpha
Helix 26
AC8
A
447 457Right-handed alpha
Helix 27
AC9
A
464 480Right-handed alpha
Helix 28
AD1
A
483 495Right-handed alpha
Helix 29
AD2
A
501 506Right-handed 310
Helix 30
AD3
A
507 511Right-handed 310
Helix 31
AD4
A
525 531Right-handed alpha
Helix 32
AD5
A
531 542Right-handed alpha
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There are 4 sheets in PDB entry 6E60. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 252first strand
Strand 2
A
395 398anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 311first strand
Strand 2
A
383 384anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 314first strand
Strand 2
A
327 328anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 358first strand
Strand 2
A
375 376anti-parallel
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