Analysis of interatomic Contacts of Structural Units in PDB entry:
6E6U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E6U entry

There are 2 chains in PDB entry 6E6U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 5ALA 272
B
 ARG 5ALA 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6E6U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 40Right-handed alpha
Helix 2
AA2
A
63 79Right-handed alpha
Helix 3
AA3
A
90 106Right-handed alpha
Helix 4
AA4
A
121 136Right-handed alpha
Helix 5
AA5
A
136 141Right-handed alpha
Helix 6
AA6
A
141 159Right-handed alpha
Helix 7
AA7
A
161 183Right-handed alpha
Helix 8
AA8
A
187 211Right-handed alpha
Helix 9
AA9
A
212 218Right-handed alpha
Helix 10
AB1
A
236 244Right-handed alpha
Helix 11
AB2
A
253 259Right-handed 310
Helix 12
AB3
A
260 272Right-handed alpha
Helix 13
AB4
B
34 41Right-handed alpha
Helix 14
AB5
B
63 79Right-handed alpha
Helix 15
AB6
B
90 106Right-handed alpha
Helix 16
AB7
B
121 136Right-handed alpha
Helix 17
AB8
B
136 141Right-handed alpha
Helix 18
AB9
B
141 159Right-handed alpha
Helix 19
AC1
B
161 185Right-handed alpha
Helix 20
AC2
B
187 211Right-handed alpha
Helix 21
AC3
B
212 217Right-handed alpha
Helix 22
AC4
B
236 244Right-handed alpha
Helix 23
AC5
B
253 259Right-handed 310
Helix 24
AC6
B
260 272Right-handed alpha
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There are 2 sheets in PDB entry 6E6U. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 11first strand
Strand 2
A
47 51anti-parallel
Strand 3
A
19 23parallel
Strand 4
A
82 88parallel
Strand 5
A
111 115parallel
Strand 6
A
221 224parallel
Strand 7
A
246 249parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 11first strand
Strand 2
B
48 51anti-parallel
Strand 3
B
19 23parallel
Strand 4
B
82 88parallel
Strand 5
B
111 115parallel
Strand 6
B
221 224parallel
Strand 7
B
246 249parallel
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