Analysis of interatomic Contacts of Structural Units in PDB entry:
6E7I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E7I entry

There are 2 chains in PDB entry 6E7I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 75ASN 568
P
 SER 5LYS 13
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6E7I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 81Right-handed 310
Helix 2
AA2
A
82 89Right-handed alpha
Helix 3
AA3
A
105 112Right-handed alpha
Helix 4
AA4
A
123 128Right-handed alpha
Helix 5
AA5
A
148 163Right-handed alpha
Helix 6
AA6
A
164 166Right-handed 310
Helix 7
AA7
A
181 186Right-handed alpha
Helix 8
AA8
A
187 190Right-handed 310
Helix 9
AA9
A
202 215Right-handed alpha
Helix 10
AB1
A
233 244Right-handed alpha
Helix 11
AB2
A
286 292Right-handed alpha
Helix 12
AB3
A
315 321Right-handed alpha
Helix 13
AB4
A
333 345Right-handed alpha
Helix 14
AB5
A
372 389Right-handed alpha
Helix 15
AB6
A
392 400Right-handed alpha
Helix 16
AB7
A
401 406Right-handed 310
Helix 17
AB8
A
411 421Right-handed alpha
Helix 18
AB9
A
425 433Right-handed alpha
Helix 19
AC1
A
477 481Right-handed 310
Helix 20
AC2
A
517 520Right-handed 310
Helix 21
AC3
A
544 548Right-handed 310
Helix 22
AC4
A
558 562Right-handed 310
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There are 8 sheets in PDB entry 6E7I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 197first strand
Strand 2
A
168 175parallel
Strand 3
A
138 144parallel
Strand 4
A
219 223parallel
Strand 5
A
310 314anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
A
348 359anti-parallel
Strand 3
A
247 256parallel
Strand 4
A
263 264anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
A
348 359anti-parallel
Strand 3
A
301 302anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 274first strand
Strand 2
A
280 284anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
469 472first strand
Strand 2
A
455 458anti-parallel
Strand 3
A
446 452anti-parallel
Strand 4
A
482 484anti-parallel
Strand 5
A
490 492anti-parallel
Strand 6
A
495 498anti-parallel
Strand 7
A
509 512anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
469 472first strand
Strand 2
A
455 458anti-parallel
Strand 3
A
446 452anti-parallel
Strand 4
A
564 567anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
522 525first strand
Strand 2
A
530 533anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
538 541first strand
Strand 2
A
551 554anti-parallel
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