Analysis of interatomic Contacts of Structural Units in PDB entry:
6E9H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6E9H entry

There are 2 chains in PDB entry 6E9H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 29PRO 296
B
 ALA 2SER 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6E9H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 58Right-handed 310
Helix 2
AA2
A
87 91Right-handed 310
Helix 3
AA3
A
112 116Right-handed 310
Helix 4
AA4
A
146 152Right-handed alpha
Helix 5
AA5
A
284 287Right-handed 310
Helix 6
AA6
B
29 33Right-handed 310
Helix 7
AA7
B
81 85Right-handed 310
Helix 8
AA8
B
126 132Right-handed alpha
Helix 9
AA9
B
187 193Right-handed alpha
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There are 13 sheets in PDB entry 6E9H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 33first strand
Strand 2
A
44 50anti-parallel
Strand 3
A
103 108anti-parallel
Strand 4
A
93 98anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 38first strand
Strand 2
A
191 195parallel
Strand 3
A
117 133anti-parallel
Strand 4
A
59 65anti-parallel
Strand 5
A
71 77anti-parallel
Strand 6
A
83 85anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 38first strand
Strand 2
A
191 195parallel
Strand 3
A
117 133anti-parallel
Strand 4
A
175 187anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
155 158anti-parallel
Strand 3
A
171 173anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 209first strand
Strand 2
A
220 229anti-parallel
Strand 3
A
260 268anti-parallel
Strand 4
A
247 249anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 209first strand
Strand 2
A
220 229anti-parallel
Strand 3
A
260 268anti-parallel
Strand 4
A
253 254anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 238first strand
Strand 2
A
277 283anti-parallel
Strand 3
A
288 294anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 14first strand
Strand 2
B
106 111parallel
Strand 3
B
87 93anti-parallel
Strand 4
B
35 40anti-parallel
Strand 5
B
47 51anti-parallel
Strand 6
B
55 56anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 14first strand
Strand 2
B
106 111parallel
Strand 3
B
87 93anti-parallel
Strand 4
B
100 102anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 24first strand
Strand 2
B
72 77anti-parallel
Strand 3
B
64 69anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 123first strand
Strand 2
B
134 144anti-parallel
Strand 3
B
177 186anti-parallel
Strand 4
B
164 166anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 123first strand
Strand 2
B
134 144anti-parallel
Strand 3
B
177 186anti-parallel
Strand 4
B
170 171anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 160first strand
Strand 2
B
150 155anti-parallel
Strand 3
B
196 202anti-parallel
Strand 4
B
205 211anti-parallel
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