Analysis of interatomic Contacts of Structural Units in PDB entry:
6EAC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6EAC entry

There are 2 chains in PDB entry 6EAC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 0	PRO 475
B	SER 0	ARG 165

There are 92 helices in PDB entry 6EAC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	7	Right-handed 310
Helix 2	AA2	A	12	17	Right-handed 310
Helix 3	AA3	A	38	44	Right-handed alpha
Helix 4	AA4	A	48	53	Right-handed 310
Helix 5	AA5	A	54	61	Right-handed alpha
Helix 6	AA6	A	130	147	Right-handed alpha
Helix 7	AA7	A	183	193	Right-handed alpha
Helix 8	AA8	A	195	211	Right-handed alpha
Helix 9	AA9	A	212	217	Right-handed 310
Helix 10	AB1	A	219	243	Right-handed alpha
Helix 11	AB2	A	250	254	Right-handed 310
Helix 12	AB3	A	291	307	Right-handed alpha
Helix 13	AB4	A	312	321	Right-handed alpha
Helix 14	AB5	A	322	339	Right-handed alpha
Helix 15	AB6	A	347	361	Right-handed alpha
Helix 16	AB7	A	365	376	Right-handed alpha
Helix 17	AB8	A	377	386	Right-handed alpha
Helix 18	AB9	A	387	389	Right-handed 310
Helix 19	AC1	A	391	408	Right-handed alpha
Helix 20	AC2	A	413	423	Right-handed alpha
Helix 21	AC3	A	431	444	Right-handed alpha
Helix 22	AC4	A	447	459	Right-handed alpha
Helix 23	AC5	A	467	472	Right-handed 310
Helix 24	AC6	B	3	7	Right-handed 310
Helix 25	AC7	B	13	17	Right-handed 310
Helix 26	AC8	B	38	44	Right-handed alpha
Helix 27	AC9	B	48	53	Right-handed alpha
Helix 28	AD1	B	54	61	Right-handed alpha
Helix 29	AD2	B	130	147	Right-handed alpha
Helix 30	AD3	B	183	193	Right-handed alpha
Helix 31	AD4	B	195	211	Right-handed alpha
Helix 32	AD5	B	212	217	Right-handed 310
Helix 33	AD6	B	219	243	Right-handed alpha
Helix 34	AD7	B	250	254	Right-handed 310
Helix 35	AD8	B	291	306	Right-handed alpha
Helix 36	AD9	B	312	321	Right-handed alpha
Helix 37	AE1	B	322	339	Right-handed alpha
Helix 38	AE2	B	347	360	Right-handed alpha
Helix 39	AE3	B	365	376	Right-handed alpha
Helix 40	AE4	B	377	386	Right-handed alpha
Helix 41	AE5	B	387	389	Right-handed 310
Helix 42	AE6	B	391	408	Right-handed alpha
Helix 43	AE7	B	413	423	Right-handed alpha
Helix 44	AE8	B	431	444	Right-handed alpha
Helix 45	AE9	B	447	459	Right-handed alpha
Helix 46	AF1	B	467	472	Right-handed alpha
Helix 47	AF2	C	3	7	Right-handed 310
Helix 48	AF3	C	11	16	Right-handed alpha
Helix 49	AF4	C	38	44	Right-handed alpha
Helix 50	AF5	C	48	53	Right-handed alpha
Helix 51	AF6	C	54	61	Right-handed alpha
Helix 52	AF7	C	130	147	Right-handed alpha
Helix 53	AF8	C	183	193	Right-handed alpha
Helix 54	AF9	C	195	211	Right-handed alpha
Helix 55	AG1	C	212	217	Right-handed 310
Helix 56	AG2	C	219	243	Right-handed alpha
Helix 57	AG3	C	250	254	Right-handed 310
Helix 58	AG4	C	291	307	Right-handed alpha
Helix 59	AG5	C	312	321	Right-handed alpha
Helix 60	AG6	C	322	339	Right-handed alpha
Helix 61	AG7	C	347	363	Right-handed alpha
Helix 62	AG8	C	365	376	Right-handed alpha
Helix 63	AG9	C	377	386	Right-handed alpha
Helix 64	AH1	C	387	389	Right-handed 310
Helix 65	AH2	C	391	408	Right-handed alpha
Helix 66	AH3	C	413	425	Right-handed alpha
Helix 67	AH4	C	431	444	Right-handed alpha
Helix 68	AH5	C	447	459	Right-handed alpha
Helix 69	AH6	C	467	472	Right-handed 310
Helix 70	AH7	D	3	7	Right-handed 310
Helix 71	AH8	D	11	16	Right-handed alpha
Helix 72	AH9	D	38	44	Right-handed alpha
Helix 73	AI1	D	48	53	Right-handed alpha
Helix 74	AI2	D	54	61	Right-handed alpha
Helix 75	AI3	D	130	147	Right-handed alpha
Helix 76	AI4	D	183	193	Right-handed alpha
Helix 77	AI5	D	195	211	Right-handed alpha
Helix 78	AI6	D	212	217	Right-handed 310
Helix 79	AI7	D	219	243	Right-handed alpha
Helix 80	AI8	D	250	254	Right-handed 310
Helix 81	AI9	D	291	307	Right-handed alpha
Helix 82	AJ1	D	312	321	Right-handed alpha
Helix 83	AJ2	D	322	339	Right-handed alpha
Helix 84	AJ3	D	347	363	Right-handed alpha
Helix 85	AJ4	D	365	376	Right-handed alpha
Helix 86	AJ5	D	377	386	Right-handed alpha
Helix 87	AJ6	D	387	389	Right-handed 310
Helix 88	AJ7	D	391	408	Right-handed alpha
Helix 89	AJ8	D	413	425	Right-handed alpha
Helix 90	AJ9	D	431	444	Right-handed alpha
Helix 91	AK1	D	447	459	Right-handed alpha
Helix 92	AK2	D	467	472	Right-handed 310

There are 20 sheets in PDB entry 6EAC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	23	first strand
Strand 2	A	73	75	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	37	first strand
Strand 2	A	152	158	anti-parallel
Strand 3	A	168	178	anti-parallel
Strand 4	A	128	129	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	101	first strand
Strand 2	A	107	113	anti-parallel
Strand 3	A	168	178	anti-parallel
Strand 4	A	162	164	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	81	first strand
Strand 2	A	84	86	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	244	245	first strand
Strand 2	A	267	268	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	23	first strand
Strand 2	B	73	75	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	37	first strand
Strand 2	B	152	164	anti-parallel
Strand 3	B	168	178	anti-parallel
Strand 4	B	107	113	anti-parallel
Strand 5	B	94	101	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	37	first strand
Strand 2	B	152	164	anti-parallel
Strand 3	B	168	178	anti-parallel
Strand 4	B	128	129	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	81	first strand
Strand 2	B	84	86	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	244	245	first strand
Strand 2	B	267	268	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	23	first strand
Strand 2	C	73	75	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	37	first strand
Strand 2	C	152	158	anti-parallel
Strand 3	C	168	178	anti-parallel
Strand 4	C	128	129	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	101	first strand
Strand 2	C	107	113	anti-parallel
Strand 3	C	168	178	anti-parallel
Strand 4	C	162	164	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	79	81	first strand
Strand 2	C	84	86	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	244	245	first strand
Strand 2	C	267	268	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	23	first strand
Strand 2	D	73	75	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	37	first strand
Strand 2	D	152	164	anti-parallel
Strand 3	D	168	178	anti-parallel
Strand 4	D	107	113	anti-parallel
Strand 5	D	94	101	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	37	first strand
Strand 2	D	152	164	anti-parallel
Strand 3	D	168	178	anti-parallel
Strand 4	D	128	129	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	79	81	first strand
Strand 2	D	84	86	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	244	245	first strand
Strand 2	D	267	268	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6EAC

Analysis of interatomic Contacts of Structural Units in PDB entry:
6EAC