Analysis of interatomic Contacts of Structural Units in PDB entry:
6EAY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EAY entry

There are 4 chains in PDB entry 6EAY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
 ASP 1GLY 212
H
 VAL 2ASP 208
A
 GLU 502ASP 614
B
 SER 32GLU 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6EAY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
L
79 83Right-handed 310
Helix 2
AA2
L
121 127Right-handed alpha
Helix 3
AA3
L
183 188Right-handed alpha
Helix 4
AA4
H
61 64Right-handed 310
Helix 5
AA5
A
550 552Right-handed 310
Helix 6
AA6
A
553 576Right-handed alpha
Helix 7
AA7
A
583 598Right-handed alpha
Helix 8
AA8
B
59 61Right-handed 310
Helix 9
AA9
B
71 74Right-handed 310
Helix 10
AB1
B
78 83Right-handed alpha
Helix 11
AB2
B
249 261Right-handed alpha
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There are 14 sheets in PDB entry 6EAY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 29anti-parallel
Strand 3
L
62 75anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 14first strand
Strand 2
L
102 107parallel
Strand 3
L
85 90anti-parallel
Strand 4
L
33 38anti-parallel
Strand 5
L
45 49anti-parallel
Strand 6
L
53 54anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
114 118first strand
Strand 2
L
131 139anti-parallel
Strand 3
L
173 180anti-parallel
Strand 4
L
159 160anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
153 155first strand
Strand 2
L
144 150anti-parallel
Strand 3
L
192 198anti-parallel
Strand 4
L
205 207anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
4 7first strand
Strand 2
H
20 24anti-parallel
Strand 3
H
77 81anti-parallel
Strand 4
H
68 72anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
57 59first strand
Strand 2
H
46 52anti-parallel
Strand 3
H
34 39anti-parallel
Strand 4
H
89 95anti-parallel
Strand 5
H
107 108anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
99 100first strand
Strand 2
H
100 100anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
143 145first strand
Strand 2
H
176 177anti-parallel
Strand 3
H
169 170anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
151 154first strand
Strand 2
H
196 200anti-parallel
Strand 3
H
205 207anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
164 165first strand
Strand 2
H
180 181anti-parallel
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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
543 548first strand
Strand 2
A
515 520anti-parallel
Strand 3
B
101 103anti-parallel
Strand 4
B
63 69parallel
Strand 5
B
177 185anti-parallel
Strand 6
B
159 161anti-parallel
Strand 7
B
165 167anti-parallel
Strand 8
B
96 98anti-parallel
Strand 9
A
580 581parallel
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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
543 548first strand
Strand 2
A
515 520anti-parallel
Strand 3
B
101 103anti-parallel
Strand 4
B
63 69parallel
Strand 5
B
177 185anti-parallel
Strand 6
B
36 39parallel
Strand 7
B
42 45anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 89first strand
Strand 2
B
151 154anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 111first strand
Strand 2
B
137 141parallel
Strand 3
B
216 223parallel
Strand 4
B
231 234anti-parallel
Strand 5
B
240 243anti-parallel
Strand 6
B
273 275parallel
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