Analysis of interatomic Contacts of Structural Units in PDB entry:
6EAZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EAZ entry

There are 2 chains in PDB entry 6EAZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 73ALA 427
B
 LYS 79ALA 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 37 helices in PDB entry 6EAZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 91Right-handed alpha
Helix 2
AA2
A
102 112Right-handed alpha
Helix 3
AA3
A
125 133Right-handed alpha
Helix 4
AA4
A
144 150Right-handed alpha
Helix 5
AA5
A
156 169Right-handed alpha
Helix 6
AA6
A
174 182Right-handed alpha
Helix 7
AA7
A
190 192Right-handed 310
Helix 8
AA8
A
193 202Right-handed alpha
Helix 9
AA9
A
229 237Right-handed alpha
Helix 10
AB1
A
246 269Right-handed alpha
Helix 11
AB2
A
277 285Right-handed alpha
Helix 12
AB3
A
292 305Right-handed alpha
Helix 13
AB4
A
311 324Right-handed alpha
Helix 14
AB5
A
324 337Right-handed alpha
Helix 15
AB6
A
343 356Right-handed alpha
Helix 16
AB7
A
360 371Right-handed alpha
Helix 17
AB8
A
380 394Right-handed alpha
Helix 18
AB9
A
402 423Right-handed alpha
Helix 19
AC1
B
81 91Right-handed alpha
Helix 20
AC2
B
102 112Right-handed alpha
Helix 21
AC3
B
125 134Right-handed alpha
Helix 22
AC4
B
135 138Right-handed 310
Helix 23
AC5
B
144 150Right-handed alpha
Helix 24
AC6
B
156 169Right-handed alpha
Helix 25
AC7
B
174 182Right-handed alpha
Helix 26
AC8
B
190 192Right-handed 310
Helix 27
AC9
B
193 203Right-handed alpha
Helix 28
AD1
B
229 237Right-handed alpha
Helix 29
AD2
B
246 270Right-handed alpha
Helix 30
AD3
B
277 285Right-handed alpha
Helix 31
AD4
B
292 304Right-handed alpha
Helix 32
AD5
B
311 324Right-handed alpha
Helix 33
AD6
B
324 338Right-handed alpha
Helix 34
AD7
B
343 356Right-handed alpha
Helix 35
AD8
B
360 372Right-handed alpha
Helix 36
AD9
B
380 394Right-handed alpha
Helix 37
AE1
B
399 425Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 6EAZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
397 400anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 100first strand
Strand 2
A
93 95anti-parallel
Strand 3
A
122 123parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 189first strand
Strand 2
A
244 245anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 276first strand
Strand 2
A
309 310anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 100first strand
Strand 2
B
93 95anti-parallel
Strand 3
B
122 124parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
188 189first strand
Strand 2
B
244 245anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
275 276first strand
Strand 2
B
309 310anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il