Analysis of interatomic Contacts of Structural Units in PDB entry:
6EB8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EB8 entry

There are 8 chains in PDB entry 6EB8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 475ILE 578
E
 LYS 476ILE 578
D
 LYS 476ILE 576
C
 TYR 477ILE 576
H
 LYS 476ILE 576
F
 LYS 476ILE 576
B
 LYS 476MET 575
G
 LYS 476ILE 576
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 6EB8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
479 484Right-handed alpha
Helix 2
AA2
A
489 501Right-handed alpha
Helix 3
AA3
A
502 506Right-handed 310
Helix 4
AA4
A
507 541Right-handed alpha
Helix 5
AA5
A
542 578Right-handed alpha
Helix 6
AA6
E
479 484Right-handed alpha
Helix 7
AA7
E
489 503Right-handed alpha
Helix 8
AA8
E
504 506Right-handed 310
Helix 9
AA9
E
507 540Right-handed alpha
Helix 10
AB1
E
542 578Right-handed alpha
Helix 11
AB2
D
479 484Right-handed alpha
Helix 12
AB3
D
489 504Right-handed alpha
Helix 13
AB4
D
507 541Right-handed alpha
Helix 14
AB5
D
542 576Right-handed alpha
Helix 15
AB6
C
479 484Right-handed alpha
Helix 16
AB7
C
489 501Right-handed alpha
Helix 17
AB8
C
502 506Right-handed 310
Helix 18
AB9
C
507 538Right-handed alpha
Helix 19
AC1
C
539 542Right-handed 310
Helix 20
AC2
C
543 574Right-handed alpha
Helix 21
AC3
H
479 484Right-handed alpha
Helix 22
AC4
H
489 503Right-handed alpha
Helix 23
AC5
H
504 506Right-handed 310
Helix 24
AC6
H
507 541Right-handed alpha
Helix 25
AC7
H
542 575Right-handed alpha
Helix 26
AC8
F
479 484Right-handed alpha
Helix 27
AC9
F
489 503Right-handed alpha
Helix 28
AD1
F
504 506Right-handed 310
Helix 29
AD2
F
507 541Right-handed alpha
Helix 30
AD3
F
542 576Right-handed alpha
Helix 31
AD4
B
479 484Right-handed alpha
Helix 32
AD5
B
489 501Right-handed alpha
Helix 33
AD6
B
502 506Right-handed 310
Helix 34
AD7
B
507 541Right-handed alpha
Helix 35
AD8
B
542 572Right-handed alpha
Helix 36
AD9
G
479 484Right-handed alpha
Helix 37
AE1
G
489 501Right-handed alpha
Helix 38
AE2
G
502 506Right-handed 310
Helix 39
AE3
G
507 538Right-handed alpha
Helix 40
AE4
G
539 541Right-handed 310
Helix 41
AE5
G
542 576Right-handed alpha
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There are no sheets in PDB entry 6EB8
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