Analysis of interatomic Contacts of Structural Units in PDB entry:
6EBM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EBM entry

There are 4 chains in PDB entry 6EBM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLU 120THR 417
D
 GLU 120THR 417
F
 GLU 120THR 417
H
 GLU 120THR 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 6EBM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
120 131Right-handed alpha
Helix 2
AA2
B
145 153Right-handed alpha
Helix 3
AA3
B
159 184Right-handed alpha
Helix 4
AA4
B
203 210Right-handed alpha
Helix 5
AA5
B
220 243Right-handed alpha
Helix 6
AA6
B
247 252Right-handed 310
Helix 7
AA7
B
253 276Right-handed alpha
Helix 8
AA8
B
286 296Right-handed alpha
Helix 9
AA9
B
297 306Right-handed 310
Helix 10
AB1
B
307 319Right-handed alpha
Helix 11
AB2
B
323 346Right-handed alpha
Helix 12
AB3
B
359 369Right-handed alpha
Helix 13
AB4
B
380 399Right-handed alpha
Helix 14
AB5
B
401 414Right-handed alpha
Helix 15
AB6
B
415 417Right-handed 310
Helix 16
AB7
D
121 131Right-handed alpha
Helix 17
AB8
D
145 153Right-handed alpha
Helix 18
AB9
D
159 184Right-handed alpha
Helix 19
AC1
D
203 210Right-handed alpha
Helix 20
AC2
D
220 243Right-handed alpha
Helix 21
AC3
D
247 252Right-handed 310
Helix 22
AC4
D
253 276Right-handed alpha
Helix 23
AC5
D
286 296Right-handed alpha
Helix 24
AC6
D
297 306Right-handed 310
Helix 25
AC7
D
307 319Right-handed alpha
Helix 26
AC8
D
323 346Right-handed alpha
Helix 27
AC9
D
359 369Right-handed alpha
Helix 28
AD1
D
380 399Right-handed alpha
Helix 29
AD2
D
401 414Right-handed alpha
Helix 30
AD3
D
415 417Right-handed 310
Helix 31
AD4
F
121 131Right-handed alpha
Helix 32
AD5
F
145 153Right-handed alpha
Helix 33
AD6
F
159 184Right-handed alpha
Helix 34
AD7
F
203 210Right-handed alpha
Helix 35
AD8
F
220 243Right-handed alpha
Helix 36
AD9
F
247 252Right-handed 310
Helix 37
AE1
F
253 275Right-handed alpha
Helix 38
AE2
F
286 296Right-handed alpha
Helix 39
AE3
F
297 306Right-handed 310
Helix 40
AE4
F
307 319Right-handed alpha
Helix 41
AE5
F
322 346Right-handed alpha
Helix 42
AE6
F
359 369Right-handed alpha
Helix 43
AE7
F
380 399Right-handed alpha
Helix 44
AE8
F
401 414Right-handed alpha
Helix 45
AE9
F
415 417Right-handed 310
Helix 46
AF1
H
121 131Right-handed alpha
Helix 47
AF2
H
145 153Right-handed alpha
Helix 48
AF3
H
159 184Right-handed alpha
Helix 49
AF4
H
203 210Right-handed alpha
Helix 50
AF5
H
220 243Right-handed alpha
Helix 51
AF6
H
247 252Right-handed 310
Helix 52
AF7
H
253 276Right-handed alpha
Helix 53
AF8
H
286 296Right-handed alpha
Helix 54
AF9
H
297 306Right-handed 310
Helix 55
AG1
H
307 319Right-handed alpha
Helix 56
AG2
H
323 346Right-handed alpha
Helix 57
AG3
H
359 369Right-handed alpha
Helix 58
AG4
H
380 399Right-handed alpha
Helix 59
AG5
H
401 414Right-handed alpha
Helix 60
AG6
H
415 417Right-handed 310
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There are no sheets in PDB entry 6EBM
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