Analysis of interatomic Contacts of Structural Units in PDB entry:
6EBP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EBP entry

There are 8 chains in PDB entry 6EBP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4SER 122
A
 GLY 124ALA 306
B
 ASN 4SER 122
B
 GLY 124PHE 314
C
 ASN 4SER 122
C
 GLY 124ARG 307
D
 ASN 4SER 122
D
 GLY 124PHE 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 6EBP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 9Right-handed 310
Helix 2
AA2
A
11 18Right-handed alpha
Helix 3
AA3
A
34 47Right-handed alpha
Helix 4
AA4
A
50 54Right-handed 310
Helix 5
AA5
A
55 58Right-handed 310
Helix 6
AA6
A
59 66Right-handed alpha
Helix 7
AA7
A
67 91Right-handed alpha
Helix 8
AA8
A
91 97Right-handed alpha
Helix 9
AA9
A
98 100Right-handed 310
Helix 10
AB1
A
102 131Right-handed alpha
Helix 11
AB2
A
132 146Right-handed alpha
Helix 12
AB3
A
146 162Right-handed alpha
Helix 13
AB4
A
164 178Right-handed alpha
Helix 14
AB5
A
180 193Right-handed alpha
Helix 15
AB6
A
196 226Right-handed alpha
Helix 16
AB7
A
229 259Right-handed alpha
Helix 17
AB8
A
264 283Right-handed alpha
Helix 18
AB9
A
297 306Right-handed alpha
Helix 19
AC1
B
4 9Right-handed 310
Helix 20
AC2
B
11 18Right-handed alpha
Helix 21
AC3
B
34 47Right-handed alpha
Helix 22
AC4
B
50 54Right-handed 310
Helix 23
AC5
B
55 58Right-handed 310
Helix 24
AC6
B
59 66Right-handed alpha
Helix 25
AC7
B
67 91Right-handed alpha
Helix 26
AC8
B
91 97Right-handed alpha
Helix 27
AC9
B
98 100Right-handed 310
Helix 28
AD1
B
102 131Right-handed alpha
Helix 29
AD2
B
132 146Right-handed alpha
Helix 30
AD3
B
146 162Right-handed alpha
Helix 31
AD4
B
164 178Right-handed alpha
Helix 32
AD5
B
180 193Right-handed alpha
Helix 33
AD6
B
196 226Right-handed alpha
Helix 34
AD7
B
229 259Right-handed alpha
Helix 35
AD8
B
264 283Right-handed alpha
Helix 36
AD9
B
297 306Right-handed alpha
Helix 37
AE1
B
309 313Right-handed 310
Helix 38
AE2
C
5 9Right-handed 310
Helix 39
AE3
C
11 18Right-handed alpha
Helix 40
AE4
C
34 47Right-handed alpha
Helix 41
AE5
C
50 54Right-handed 310
Helix 42
AE6
C
55 58Right-handed 310
Helix 43
AE7
C
59 64Right-handed alpha
Helix 44
AE8
C
67 91Right-handed alpha
Helix 45
AE9
C
91 97Right-handed alpha
Helix 46
AF1
C
98 100Right-handed 310
Helix 47
AF2
C
102 131Right-handed alpha
Helix 48
AF3
C
132 146Right-handed alpha
Helix 49
AF4
C
146 162Right-handed alpha
Helix 50
AF5
C
164 178Right-handed alpha
Helix 51
AF6
C
180 193Right-handed alpha
Helix 52
AF7
C
196 226Right-handed alpha
Helix 53
AF8
C
229 259Right-handed alpha
Helix 54
AF9
C
264 283Right-handed alpha
Helix 55
AG1
C
297 306Right-handed alpha
Helix 56
AG2
D
5 9Right-handed 310
Helix 57
AG3
D
11 18Right-handed alpha
Helix 58
AG4
D
34 47Right-handed alpha
Helix 59
AG5
D
50 54Right-handed 310
Helix 60
AG6
D
55 58Right-handed 310
Helix 61
AG7
D
59 66Right-handed alpha
Helix 62
AG8
D
67 91Right-handed alpha
Helix 63
AG9
D
91 97Right-handed alpha
Helix 64
AH1
D
98 100Right-handed 310
Helix 65
AH2
D
102 131Right-handed alpha
Helix 66
AH3
D
132 146Right-handed alpha
Helix 67
AH4
D
146 162Right-handed alpha
Helix 68
AH5
D
164 178Right-handed alpha
Helix 69
AH6
D
180 193Right-handed alpha
Helix 70
AH7
D
196 226Right-handed alpha
Helix 71
AH8
D
229 259Right-handed alpha
Helix 72
AH9
D
264 283Right-handed alpha
Helix 73
AI1
D
297 306Right-handed alpha
Helix 74
AI2
D
309 313Right-handed 310
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There are no sheets in PDB entry 6EBP
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