Analysis of interatomic Contacts of Structural Units in PDB entry:
6EC8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EC8 entry

There is 1 chain in PDB entry 6EC8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 17GLY 857
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6EC8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 33Right-handed alpha
Helix 2
AA2
A
36 70Right-handed alpha
Helix 3
AA3
A
81 92Right-handed alpha
Helix 4
AA4
A
101 108Right-handed alpha
Helix 5
AA5
A
109 153Right-handed alpha
Helix 6
AA6
A
154 165Right-handed alpha
Helix 7
AA7
A
165 178Right-handed alpha
Helix 8
AA8
A
184 201Right-handed alpha
Helix 9
AA9
A
243 256Right-handed alpha
Helix 10
AB1
A
257 261Right-handed 310
Helix 11
AB2
A
296 306Right-handed alpha
Helix 12
AB3
A
317 327Right-handed alpha
Helix 13
AB4
A
332 346Right-handed alpha
Helix 14
AB5
A
362 374Right-handed alpha
Helix 15
AB6
A
380 397Right-handed alpha
Helix 16
AB7
A
427 440Right-handed alpha
Helix 17
AB8
A
441 444Right-handed 310
Helix 18
AB9
A
446 462Right-handed alpha
Helix 19
AC1
A
469 482Right-handed alpha
Helix 20
AC2
A
484 486Right-handed 310
Helix 21
AC3
A
487 495Right-handed alpha
Helix 22
AC4
A
510 529Right-handed alpha
Helix 23
AC5
A
540 550Right-handed alpha
Helix 24
AC6
A
585 598Right-handed alpha
Helix 25
AC7
A
624 628Right-handed 310
Helix 26
AC8
A
647 649Right-handed 310
Helix 27
AC9
A
688 692Right-handed 310
Helix 28
AD1
A
693 704Right-handed alpha
Helix 29
AD2
A
751 753Right-handed 310
Helix 30
AD3
A
763 776Right-handed alpha
Helix 31
AD4
A
809 820Right-handed alpha
Helix 32
AD5
A
834 838Right-handed 310
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There are 6 sheets in PDB entry 6EC8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 230first strand
Strand 2
A
419 421anti-parallel
Strand 3
A
209 216parallel
Strand 4
A
18 24anti-parallel
Strand 5
A
850 856anti-parallel
Strand 6
A
561 568anti-parallel
Strand 7
A
572 580anti-parallel
Strand 8
A
739 742parallel
Strand 9
A
733 736anti-parallel
Strand 10
A
536 539parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 242first strand
Strand 2
A
408 413anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 268first strand
Strand 2
A
349 353anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 274first strand
Strand 2
A
278 282anti-parallel
Strand 3
A
290 294anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 468first strand
Strand 2
A
657 661anti-parallel
Strand 3
A
668 672anti-parallel
Strand 4
A
678 682anti-parallel
Strand 5
A
613 618parallel
Strand 6
A
635 638parallel
Strand 7
A
651 653parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
729 731first strand
Strand 2
A
745 749anti-parallel
Strand 3
A
825 830anti-parallel
Strand 4
A
781 784anti-parallel
Strand 5
A
803 806anti-parallel
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