Analysis of interatomic Contacts of Structural Units in PDB entry:
6ED3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ED3 entry

There are 6 chains in PDB entry 6ED3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 159	LEU 845
B	GLN 159	LEU 845
C	GLN 159	LEU 845
D	GLN 159	LEU 845
E	GLN 159	LEU 845
F	GLN 159	LEU 845

There are168 helices in PDB entry 6ED3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	159	163	Right-handed 310
Helix 2	AA2	A	167	173	Right-handed alpha
Helix 3	AA3	A	183	195	Right-handed alpha
Helix 4	AA4	A	212	226	Right-handed alpha
Helix 5	AA5	A	229	233	Right-handed 310
Helix 6	AA6	A	255	268	Right-handed alpha
Helix 7	AA7	A	279	283	Right-handed 310
Helix 8	AA8	A	300	307	Right-handed alpha
Helix 9	AA9	A	317	324	Right-handed alpha
Helix 10	AB1	A	330	334	Right-handed 310
Helix 11	AB2	A	343	354	Right-handed alpha
Helix 12	AB3	A	354	362	Right-handed alpha
Helix 13	AB4	A	367	377	Right-handed alpha
Helix 14	AB5	A	389	407	Right-handed alpha
Helix 15	AB6	A	534	545	Right-handed alpha
Helix 16	AB7	A	558	563	Right-handed alpha
Helix 17	AB8	A	567	571	Right-handed 310
Helix 18	AB9	A	575	579	Right-handed 310
Helix 19	AC1	A	586	591	Right-handed alpha
Helix 20	AC2	A	644	648	Right-handed 310
Helix 21	AC3	A	680	684	Right-handed 310
Helix 22	AC4	A	687	693	Right-handed alpha
Helix 23	AC5	A	731	739	Right-handed alpha
Helix 24	AC6	A	740	745	Right-handed alpha
Helix 25	AC7	A	758	760	Right-handed 310
Helix 26	AC8	A	761	776	Right-handed alpha
Helix 27	AC9	A	786	797	Right-handed alpha
Helix 28	AD1	A	806	824	Right-handed alpha
Helix 29	AD2	B	159	163	Right-handed 310
Helix 30	AD3	B	167	173	Right-handed alpha
Helix 31	AD4	B	183	195	Right-handed alpha
Helix 32	AD5	B	212	226	Right-handed alpha
Helix 33	AD6	B	229	233	Right-handed 310
Helix 34	AD7	B	255	269	Right-handed alpha
Helix 35	AD8	B	279	283	Right-handed 310
Helix 36	AD9	B	300	307	Right-handed alpha
Helix 37	AE1	B	317	324	Right-handed alpha
Helix 38	AE2	B	330	334	Right-handed 310
Helix 39	AE3	B	343	354	Right-handed alpha
Helix 40	AE4	B	354	362	Right-handed alpha
Helix 41	AE5	B	367	377	Right-handed alpha
Helix 42	AE6	B	389	407	Right-handed alpha
Helix 43	AE7	B	534	545	Right-handed alpha
Helix 44	AE8	B	557	563	Right-handed alpha
Helix 45	AE9	B	567	571	Right-handed 310
Helix 46	AF1	B	575	579	Right-handed 310
Helix 47	AF2	B	586	591	Right-handed alpha
Helix 48	AF3	B	644	648	Right-handed 310
Helix 49	AF4	B	680	684	Right-handed 310
Helix 50	AF5	B	687	693	Right-handed alpha
Helix 51	AF6	B	731	739	Right-handed alpha
Helix 52	AF7	B	740	745	Right-handed alpha
Helix 53	AF8	B	758	760	Right-handed 310
Helix 54	AF9	B	761	776	Right-handed alpha
Helix 55	AG1	B	786	797	Right-handed alpha
Helix 56	AG2	B	806	824	Right-handed alpha
Helix 57	AG3	C	159	163	Right-handed 310
Helix 58	AG4	C	167	173	Right-handed alpha
Helix 59	AG5	C	183	195	Right-handed alpha
Helix 60	AG6	C	212	226	Right-handed alpha
Helix 61	AG7	C	229	233	Right-handed 310
Helix 62	AG8	C	255	269	Right-handed alpha
Helix 63	AG9	C	279	283	Right-handed 310
Helix 64	AH1	C	300	307	Right-handed alpha
Helix 65	AH2	C	317	324	Right-handed alpha
Helix 66	AH3	C	330	334	Right-handed 310
Helix 67	AH4	C	343	354	Right-handed alpha
Helix 68	AH5	C	354	362	Right-handed alpha
Helix 69	AH6	C	367	377	Right-handed alpha
Helix 70	AH7	C	389	407	Right-handed alpha
Helix 71	AH8	C	534	545	Right-handed alpha
Helix 72	AH9	C	557	563	Right-handed alpha
Helix 73	AI1	C	567	571	Right-handed 310
Helix 74	AI2	C	575	579	Right-handed 310
Helix 75	AI3	C	586	591	Right-handed alpha
Helix 76	AI4	C	644	648	Right-handed 310
Helix 77	AI5	C	680	684	Right-handed 310
Helix 78	AI6	C	687	693	Right-handed alpha
Helix 79	AI7	C	731	739	Right-handed alpha
Helix 80	AI8	C	740	745	Right-handed alpha
Helix 81	AI9	C	758	760	Right-handed 310
Helix 82	AJ1	C	761	776	Right-handed alpha
Helix 83	AJ2	C	786	797	Right-handed alpha
Helix 84	AJ3	C	806	824	Right-handed alpha
Helix 85	AJ4	D	159	163	Right-handed 310
Helix 86	AJ5	D	167	173	Right-handed alpha
Helix 87	AJ6	D	183	195	Right-handed alpha
Helix 88	AJ7	D	212	226	Right-handed alpha
Helix 89	AJ8	D	229	233	Right-handed 310
Helix 90	AJ9	D	255	269	Right-handed alpha
Helix 91	AK1	D	279	283	Right-handed 310
Helix 92	AK2	D	300	307	Right-handed alpha
Helix 93	AK3	D	317	324	Right-handed alpha
Helix 94	AK4	D	330	334	Right-handed 310
Helix 95	AK5	D	343	354	Right-handed alpha
Helix 96	AK6	D	354	362	Right-handed alpha
Helix 97	AK7	D	367	377	Right-handed alpha
Helix 98	AK8	D	389	407	Right-handed alpha
Helix 99	AK9	D	534	545	Right-handed alpha
Helix 100	AL1	D	557	563	Right-handed alpha
Helix 101	AL2	D	567	571	Right-handed 310
Helix 102	AL3	D	575	579	Right-handed 310
Helix 103	AL4	D	586	591	Right-handed alpha
Helix 104	AL5	D	644	648	Right-handed 310
Helix 105	AL6	D	680	684	Right-handed 310
Helix 106	AL7	D	687	693	Right-handed alpha
Helix 107	AL8	D	731	739	Right-handed alpha
Helix 108	AL9	D	740	745	Right-handed alpha
Helix 109	AM1	D	758	760	Right-handed 310
Helix 110	AM2	D	761	776	Right-handed alpha
Helix 111	AM3	D	786	797	Right-handed alpha
Helix 112	AM4	D	806	824	Right-handed alpha
Helix 113	AM5	E	159	163	Right-handed 310
Helix 114	AM6	E	167	173	Right-handed alpha
Helix 115	AM7	E	183	195	Right-handed alpha
Helix 116	AM8	E	212	226	Right-handed alpha
Helix 117	AM9	E	229	233	Right-handed 310
Helix 118	AN1	E	255	269	Right-handed alpha
Helix 119	AN2	E	279	283	Right-handed 310
Helix 120	AN3	E	300	307	Right-handed alpha
Helix 121	AN4	E	317	324	Right-handed alpha
Helix 122	AN5	E	330	334	Right-handed 310
Helix 123	AN6	E	343	354	Right-handed alpha
Helix 124	AN7	E	354	362	Right-handed alpha
Helix 125	AN8	E	367	377	Right-handed alpha
Helix 126	AN9	E	389	407	Right-handed alpha
Helix 127	AO1	E	534	545	Right-handed alpha
Helix 128	AO2	E	557	563	Right-handed alpha
Helix 129	AO3	E	567	571	Right-handed 310
Helix 130	AO4	E	575	579	Right-handed 310
Helix 131	AO5	E	586	591	Right-handed alpha
Helix 132	AO6	E	644	648	Right-handed 310
Helix 133	AO7	E	680	684	Right-handed 310
Helix 134	AO8	E	687	693	Right-handed alpha
Helix 135	AO9	E	731	739	Right-handed alpha
Helix 136	AP1	E	740	745	Right-handed alpha
Helix 137	AP2	E	758	760	Right-handed 310
Helix 138	AP3	E	761	776	Right-handed alpha
Helix 139	AP4	E	786	797	Right-handed alpha
Helix 140	AP5	E	806	824	Right-handed alpha
Helix 141	AP6	F	159	163	Right-handed 310
Helix 142	AP7	F	167	173	Right-handed alpha
Helix 143	AP8	F	183	195	Right-handed alpha
Helix 144	AP9	F	212	226	Right-handed alpha
Helix 145	AQ1	F	229	233	Right-handed 310
Helix 146	AQ2	F	255	269	Right-handed alpha
Helix 147	AQ3	F	279	283	Right-handed 310
Helix 148	AQ4	F	300	307	Right-handed alpha
Helix 149	AQ5	F	317	324	Right-handed alpha
Helix 150	AQ6	F	330	334	Right-handed 310
Helix 151	AQ7	F	344	354	Right-handed alpha
Helix 152	AQ8	F	354	362	Right-handed alpha
Helix 153	AQ9	F	367	377	Right-handed alpha
Helix 154	AR1	F	389	407	Right-handed alpha
Helix 155	AR2	F	534	545	Right-handed alpha
Helix 156	AR3	F	557	563	Right-handed alpha
Helix 157	AR4	F	567	571	Right-handed 310
Helix 158	AR5	F	575	579	Right-handed 310
Helix 159	AR6	F	586	591	Right-handed alpha
Helix 160	AR7	F	644	648	Right-handed 310
Helix 161	AR8	F	680	684	Right-handed 310
Helix 162	AR9	F	687	693	Right-handed alpha
Helix 163	AS1	F	731	739	Right-handed alpha
Helix 164	AS2	F	740	745	Right-handed alpha
Helix 165	AS3	F	758	760	Right-handed 310
Helix 166	AS4	F	761	776	Right-handed alpha
Helix 167	AS5	F	786	797	Right-handed alpha
Helix 168	AS6	F	806	824	Right-handed alpha

There are 36 sheets in PDB entry 6ED3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	316	first strand
Strand 2	A	202	206	parallel
Strand 3	A	335	338	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	366	first strand
Strand 2	A	532	533	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	715	719	first strand
Strand 2	A	601	606	parallel
Strand 3	A	751	752	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	632	635	first strand
Strand 2	A	676	679	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	700	701	first strand
Strand 2	A	709	710	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	782	785	first strand
Strand 2	A	833	836	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	236	239	first strand
Strand 2	B	273	276	parallel
Strand 3	B	310	316	parallel
Strand 4	B	202	206	parallel
Strand 5	B	335	338	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	365	366	first strand
Strand 2	B	532	533	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	715	719	first strand
Strand 2	B	601	606	parallel
Strand 3	B	751	752	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	632	635	first strand
Strand 2	B	676	679	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	700	701	first strand
Strand 2	B	709	710	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	782	785	first strand
Strand 2	B	833	836	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	236	239	first strand
Strand 2	C	273	276	parallel
Strand 3	C	310	316	parallel
Strand 4	C	202	206	parallel
Strand 5	C	335	338	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	365	366	first strand
Strand 2	C	532	533	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	715	719	first strand
Strand 2	C	601	606	parallel
Strand 3	C	751	752	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	632	635	first strand
Strand 2	C	676	679	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	700	701	first strand
Strand 2	C	709	710	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	782	785	first strand
Strand 2	C	833	836	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	236	239	first strand
Strand 2	D	273	276	parallel
Strand 3	D	310	316	parallel
Strand 4	D	202	206	parallel
Strand 5	D	335	338	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	365	366	first strand
Strand 2	D	532	533	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	715	719	first strand
Strand 2	D	601	606	parallel
Strand 3	D	751	752	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	632	635	first strand
Strand 2	D	676	679	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	700	701	first strand
Strand 2	D	709	710	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	782	785	first strand
Strand 2	D	833	836	parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	236	239	first strand
Strand 2	E	273	276	parallel
Strand 3	E	310	316	parallel
Strand 4	E	202	206	parallel
Strand 5	E	335	338	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	365	366	first strand
Strand 2	E	532	533	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	715	719	first strand
Strand 2	E	601	606	parallel
Strand 3	E	751	752	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	632	635	first strand
Strand 2	E	676	679	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	700	701	first strand
Strand 2	E	709	710	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	782	785	first strand
Strand 2	E	833	836	parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	236	239	first strand
Strand 2	F	273	276	parallel
Strand 3	F	310	316	parallel
Strand 4	F	202	206	parallel
Strand 5	F	335	338	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	365	366	first strand
Strand 2	F	532	533	parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	715	719	first strand
Strand 2	F	601	606	parallel
Strand 3	F	751	752	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	632	635	first strand
Strand 2	F	676	679	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	700	701	first strand
Strand 2	F	709	710	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	782	785	first strand
Strand 2	F	833	836	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ED3

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ED3