Analysis of interatomic Contacts of Structural Units in PDB entry:
6EE0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EE0 entry

There are 3 chains in PDB entry 6EE0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1181SER 1312
B
 SER 1181SER 1312
C
 SER 1181SER 1312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6EE0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1220 1233Right-handed alpha
Helix 2
AA2
A
1235 1241Right-handed 310
Helix 3
AA3
A
1253 1278Right-handed alpha
Helix 4
AA4
A
1284 1288Right-handed 310
Helix 5
AA5
A
1293 1301Right-handed alpha
Helix 6
AA6
A
1302 1305Right-handed 310
Helix 7
AA7
B
1196 1200Right-handed 310
Helix 8
AA8
B
1221 1233Right-handed alpha
Helix 9
AA9
B
1235 1241Right-handed 310
Helix 10
AB1
B
1253 1278Right-handed alpha
Helix 11
AB2
B
1281 1289Right-handed alpha
Helix 12
AB3
B
1293 1301Right-handed alpha
Helix 13
AB4
B
1302 1305Right-handed 310
Helix 14
AB5
C
1196 1200Right-handed 310
Helix 15
AB6
C
1220 1233Right-handed alpha
Helix 16
AB7
C
1235 1241Right-handed 310
Helix 17
AB8
C
1253 1278Right-handed alpha
Helix 18
AB9
C
1284 1289Right-handed alpha
Helix 19
AC1
C
1293 1301Right-handed alpha
Helix 20
AC2
C
1302 1305Right-handed 310
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There are 3 sheets in PDB entry 6EE0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1184 1194first strand
Strand 2
A
1201 1210anti-parallel
Strand 3
A
1213 1219anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1184 1194first strand
Strand 2
B
1201 1210anti-parallel
Strand 3
B
1213 1220anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1184 1194first strand
Strand 2
C
1201 1210anti-parallel
Strand 3
C
1213 1219anti-parallel
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