Analysis of interatomic Contacts of Structural Units in PDB entry:
6EEQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EEQ entry

There are 2 chains in PDB entry 6EEQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 15HIS 313
A
 TRP 315SER 490
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6EEQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 40Right-handed alpha
Helix 2
AA2
A
68 80Right-handed alpha
Helix 3
AA3
A
101 115Right-handed alpha
Helix 4
AA4
A
124 142Right-handed alpha
Helix 5
AA5
A
145 153Right-handed 310
Helix 6
AA6
A
161 182Right-handed alpha
Helix 7
AA7
A
185 187Right-handed 310
Helix 8
AA8
A
198 208Right-handed alpha
Helix 9
AA9
A
211 213Right-handed 310
Helix 10
AB1
A
221 225Right-handed 310
Helix 11
AB2
A
229 243Right-handed alpha
Helix 12
AB3
A
264 275Right-handed alpha
Helix 13
AB4
A
285 290Right-handed alpha
Helix 14
AB5
A
292 297Right-handed alpha
Helix 15
AB6
A
298 300Right-handed 310
Helix 16
AB7
A
301 305Right-handed 310
Helix 17
AB8
A
313 315Right-handed 310
Helix 18
AB9
A
330 338Right-handed alpha
Helix 19
AC1
A
352 356Right-handed 310
Helix 20
AC2
A
364 401Right-handed alpha
Helix 21
AC3
A
429 445Right-handed alpha
Helix 22
AC4
A
470 487Right-handed alpha
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There are 2 sheets in PDB entry 6EEQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
448 454parallel
Strand 3
A
457 463anti-parallel
Strand 4
A
415 420anti-parallel
Strand 5
A
405 409anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 159first strand
Strand 2
A
323 327anti-parallel
Strand 3
A
307 311anti-parallel
Strand 4
A
278 282parallel
Strand 5
A
246 253parallel
Strand 6
A
189 194parallel
Strand 7
A
215 218parallel
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