Analysis of interatomic Contacts of Structural Units in PDB entry:
6EEW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EEW entry

There are 5 chains in PDB entry 6EEW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 19HIS 318
A
 TRP 320LEU 497
B
 PHE 19HIS 318
B
 TRP 320LEU 497
C
 PHE 19HIS 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are104 helices in PDB entry 6EEW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 45Right-handed alpha
Helix 2
AA2
A
46 48Right-handed 310
Helix 3
AA3
A
57 62Right-handed 310
Helix 4
AA4
A
73 84Right-handed alpha
Helix 5
AA5
A
85 89Right-handed 310
Helix 6
AA6
A
106 120Right-handed alpha
Helix 7
AA7
A
129 147Right-handed alpha
Helix 8
AA8
A
150 154Right-handed 310
Helix 9
AA9
A
166 187Right-handed alpha
Helix 10
AB1
A
188 192Right-handed 310
Helix 11
AB2
A
205 213Right-handed alpha
Helix 12
AB3
A
216 218Right-handed 310
Helix 13
AB4
A
226 230Right-handed 310
Helix 14
AB5
A
234 248Right-handed alpha
Helix 15
AB6
A
269 281Right-handed alpha
Helix 16
AB7
A
290 296Right-handed 310
Helix 17
AB8
A
297 302Right-handed alpha
Helix 18
AB9
A
303 305Right-handed 310
Helix 19
AC1
A
306 310Right-handed 310
Helix 20
AC2
A
316 321Right-handed alpha
Helix 21
AC3
A
334 342Right-handed alpha
Helix 22
AC4
A
345 351Right-handed alpha
Helix 23
AC5
A
361 366Right-handed 310
Helix 24
AC6
A
374 410Right-handed alpha
Helix 25
AC7
A
431 434Right-handed 310
Helix 26
AC8
A
437 452Right-handed alpha
Helix 27
AC9
A
478 497Right-handed alpha
Helix 28
AD1
B
23 45Right-handed alpha
Helix 29
AD2
B
46 48Right-handed 310
Helix 30
AD3
B
57 62Right-handed 310
Helix 31
AD4
B
73 85Right-handed alpha
Helix 32
AD5
B
86 89Right-handed 310
Helix 33
AD6
B
106 120Right-handed alpha
Helix 34
AD7
B
129 147Right-handed alpha
Helix 35
AD8
B
150 154Right-handed 310
Helix 36
AD9
B
166 187Right-handed alpha
Helix 37
AE1
B
188 192Right-handed 310
Helix 38
AE2
B
205 213Right-handed alpha
Helix 39
AE3
B
216 218Right-handed 310
Helix 40
AE4
B
226 230Right-handed 310
Helix 41
AE5
B
234 248Right-handed alpha
Helix 42
AE6
B
269 280Right-handed alpha
Helix 43
AE7
B
290 297Right-handed 310
Helix 44
AE8
B
300 305Right-handed 310
Helix 45
AE9
B
306 310Right-handed 310
Helix 46
AF1
B
316 321Right-handed alpha
Helix 47
AF2
B
334 342Right-handed alpha
Helix 48
AF3
B
361 366Right-handed 310
Helix 49
AF4
B
374 410Right-handed alpha
Helix 50
AF5
B
431 434Right-handed 310
Helix 51
AF6
B
437 452Right-handed alpha
Helix 52
AF7
B
478 497Right-handed alpha
Helix 53
AF8
C
23 45Right-handed alpha
Helix 54
AF9
C
46 48Right-handed 310
Helix 55
AG1
C
59 63Right-handed 310
Helix 56
AG2
C
73 85Right-handed alpha
Helix 57
AG3
C
86 89Right-handed 310
Helix 58
AG4
C
106 120Right-handed alpha
Helix 59
AG5
C
129 147Right-handed alpha
Helix 60
AG6
C
150 154Right-handed 310
Helix 61
AG7
C
166 187Right-handed alpha
Helix 62
AG8
C
188 192Right-handed 310
Helix 63
AG9
C
204 213Right-handed alpha
Helix 64
AH1
C
216 218Right-handed 310
Helix 65
AH2
C
226 230Right-handed 310
Helix 66
AH3
C
234 248Right-handed alpha
Helix 67
AH4
C
269 281Right-handed alpha
Helix 68
AH5
C
290 297Right-handed 310
Helix 69
AH6
C
300 305Right-handed 310
Helix 70
AH7
C
306 310Right-handed 310
Helix 71
AH8
C
316 321Right-handed alpha
Helix 72
AH9
C
334 342Right-handed alpha
Helix 73
AI1
C
361 366Right-handed 310
Helix 74
AI2
C
374 410Right-handed alpha
Helix 75
AI3
C
431 434Right-handed 310
Helix 76
AI4
C
437 452Right-handed alpha
Helix 77
AI5
C
478 496Right-handed alpha
Helix 78
AI6
D
23 45Right-handed alpha
Helix 79
AI7
D
46 48Right-handed 310
Helix 80
AI8
D
59 63Right-handed 310
Helix 81
AI9
D
73 84Right-handed alpha
Helix 82
AJ1
D
85 89Right-handed 310
Helix 83
AJ2
D
106 120Right-handed alpha
Helix 84
AJ3
D
129 147Right-handed alpha
Helix 85
AJ4
D
150 154Right-handed 310
Helix 86
AJ5
D
166 187Right-handed alpha
Helix 87
AJ6
D
188 192Right-handed 310
Helix 88
AJ7
D
201 203Right-handed 310
Helix 89
AJ8
D
204 213Right-handed alpha
Helix 90
AJ9
D
216 218Right-handed 310
Helix 91
AK1
D
226 230Right-handed 310
Helix 92
AK2
D
234 248Right-handed alpha
Helix 93
AK3
D
269 281Right-handed alpha
Helix 94
AK4
D
290 296Right-handed 310
Helix 95
AK5
D
297 302Right-handed alpha
Helix 96
AK6
D
303 305Right-handed 310
Helix 97
AK7
D
306 310Right-handed 310
Helix 98
AK8
D
316 321Right-handed alpha
Helix 99
AK9
D
334 342Right-handed alpha
Helix 100
AL1
D
361 366Right-handed 310
Helix 101
AL2
D
374 411Right-handed alpha
Helix 102
AL3
D
431 434Right-handed 310
Helix 103
AL4
D
437 452Right-handed alpha
Helix 104
AL5
D
478 496Right-handed alpha
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There are 8 sheets in PDB entry 6EEW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 164first strand
Strand 2
A
328 332anti-parallel
Strand 3
A
312 315anti-parallel
Strand 4
A
283 287parallel
Strand 5
A
251 258parallel
Strand 6
A
194 199parallel
Strand 7
A
220 223parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 416first strand
Strand 2
A
424 429anti-parallel
Strand 3
A
465 471anti-parallel
Strand 4
A
459 462anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 164first strand
Strand 2
B
328 332anti-parallel
Strand 3
B
312 315anti-parallel
Strand 4
B
283 287parallel
Strand 5
B
251 258parallel
Strand 6
B
194 199parallel
Strand 7
B
220 223parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
414 416first strand
Strand 2
B
424 429anti-parallel
Strand 3
B
465 471anti-parallel
Strand 4
B
459 462anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 164first strand
Strand 2
C
328 332anti-parallel
Strand 3
C
312 315anti-parallel
Strand 4
C
283 287parallel
Strand 5
C
251 258parallel
Strand 6
C
194 199parallel
Strand 7
C
220 223parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
414 416first strand
Strand 2
C
424 429anti-parallel
Strand 3
C
465 471anti-parallel
Strand 4
C
459 462anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
160 164first strand
Strand 2
D
328 332anti-parallel
Strand 3
D
312 315anti-parallel
Strand 4
D
283 287parallel
Strand 5
D
251 258parallel
Strand 6
D
194 199parallel
Strand 7
D
220 223parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
414 416first strand
Strand 2
D
424 429anti-parallel
Strand 3
D
465 471anti-parallel
Strand 4
D
459 462anti-parallel
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