Analysis of interatomic Contacts of Structural Units in PDB entry:
6EEZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EEZ entry

There are 4 chains in PDB entry 6EEZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 63SER 248
B
 SER 63GLY 252
C
 ASP 68SER 248
D
 ASP 68TYR 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6EEZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
64 78Right-handed alpha
Helix 2
AA2
A
78 83Right-handed alpha
Helix 3
AA3
A
107 113Right-handed alpha
Helix 4
AA4
A
113 123Right-handed alpha
Helix 5
AA5
A
137 154Right-handed alpha
Helix 6
AA6
A
157 168Right-handed alpha
Helix 7
AA7
A
173 184Right-handed alpha
Helix 8
AA8
A
187 198Right-handed alpha
Helix 9
AA9
A
198 217Right-handed alpha
Helix 10
AB1
A
236 248Right-handed alpha
Helix 11
AB2
B
64 78Right-handed alpha
Helix 12
AB3
B
78 83Right-handed alpha
Helix 13
AB4
B
107 113Right-handed alpha
Helix 14
AB5
B
113 123Right-handed alpha
Helix 15
AB6
B
137 154Right-handed alpha
Helix 16
AB7
B
157 168Right-handed alpha
Helix 17
AB8
B
173 184Right-handed alpha
Helix 18
AB9
B
187 198Right-handed alpha
Helix 19
AC1
B
198 216Right-handed alpha
Helix 20
AC2
B
236 248Right-handed alpha
Helix 21
AC3
C
69 78Right-handed alpha
Helix 22
AC4
C
78 83Right-handed alpha
Helix 23
AC5
C
107 113Right-handed alpha
Helix 24
AC6
C
113 123Right-handed alpha
Helix 25
AC7
C
137 154Right-handed alpha
Helix 26
AC8
C
157 168Right-handed alpha
Helix 27
AC9
C
173 184Right-handed alpha
Helix 28
AD1
C
189 198Right-handed alpha
Helix 29
AD2
C
198 217Right-handed alpha
Helix 30
AD3
C
236 248Right-handed alpha
Helix 31
AD4
D
69 78Right-handed alpha
Helix 32
AD5
D
78 83Right-handed alpha
Helix 33
AD6
D
107 113Right-handed alpha
Helix 34
AD7
D
113 123Right-handed alpha
Helix 35
AD8
D
137 154Right-handed alpha
Helix 36
AD9
D
157 168Right-handed alpha
Helix 37
AE1
D
173 185Right-handed alpha
Helix 38
AE2
D
187 198Right-handed alpha
Helix 39
AE3
D
198 216Right-handed alpha
Helix 40
AE4
D
236 247Right-handed alpha
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There are 4 sheets in PDB entry 6EEZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 232first strand
Strand 2
A
223 226anti-parallel
Strand 3
A
98 103anti-parallel
Strand 4
A
127 132parallel
Strand 5
A
89 91anti-parallel
Strand 6
B
250 252anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 91first strand
Strand 2
B
127 132anti-parallel
Strand 3
B
98 103parallel
Strand 4
B
223 226anti-parallel
Strand 5
B
229 232anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
89 91first strand
Strand 2
C
127 132anti-parallel
Strand 3
C
98 103parallel
Strand 4
C
223 226anti-parallel
Strand 5
C
229 232anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
89 91first strand
Strand 2
D
127 132anti-parallel
Strand 3
D
98 103parallel
Strand 4
D
223 226anti-parallel
Strand 5
D
229 232anti-parallel
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