Analysis of interatomic Contacts of Structural Units in PDB entry:
6EFV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EFV entry

There is 1 chain in PDB entry 6EFV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 64TYR 599
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6EFV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 90Right-handed alpha
Helix 2
AA2
A
99 101Right-handed 310
Helix 3
AA3
A
102 109Right-handed 310
Helix 4
AA4
A
125 127Right-handed 310
Helix 5
AA5
A
128 136Right-handed alpha
Helix 6
AA6
A
162 175Right-handed alpha
Helix 7
AA7
A
192 205Right-handed alpha
Helix 8
AA8
A
283 294Right-handed alpha
Helix 9
AA9
A
311 318Right-handed alpha
Helix 10
AB1
A
325 337Right-handed alpha
Helix 11
AB2
A
341 345Right-handed 310
Helix 12
AB3
A
347 358Right-handed alpha
Helix 13
AB4
A
359 367Right-handed alpha
Helix 14
AB5
A
372 380Right-handed alpha
Helix 15
AB6
A
393 398Right-handed alpha
Helix 16
AB7
A
419 428Right-handed alpha
Helix 17
AB8
A
460 463Right-handed 310
Helix 18
AB9
A
464 477Right-handed alpha
Helix 19
AC1
A
491 496Right-handed alpha
Helix 20
AC2
A
498 508Right-handed alpha
Helix 21
AC3
A
527 535Right-handed alpha
Helix 22
AC4
A
535 545Right-handed alpha
Helix 23
AC5
A
557 575Right-handed alpha
Helix 24
AC6
A
577 591Right-handed alpha
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There are 5 sheets in PDB entry 6EFV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 97first strand
Strand 2
A
65 69parallel
Strand 3
A
111 116parallel
Strand 4
A
147 152parallel
Strand 5
A
178 179parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 389first strand
Strand 2
A
275 278anti-parallel
Strand 3
A
434 440anti-parallel
Strand 4
A
237 246anti-parallel
Strand 5
A
255 262anti-parallel
Strand 6
A
400 407anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 304first strand
Strand 2
A
307 310anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 412first strand
Strand 2
A
415 418anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
513 518first strand
Strand 2
A
483 489parallel
Strand 3
A
455 458parallel
Strand 4
A
548 554parallel
Strand 5
A
594 599parallel
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