Analysis of interatomic Contacts of Structural Units in PDB entry:
6EFX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EFX entry

There is 1 chain in PDB entry 6EFX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0LEU 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6EFX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 15Right-handed alpha
Helix 2
AA2
A
42 56Right-handed alpha
Helix 3
AA3
A
65 76Right-handed alpha
Helix 4
AA4
A
90 103Right-handed alpha
Helix 5
AA5
A
117 134Right-handed alpha
Helix 6
AA6
A
143 152Right-handed alpha
Helix 7
AA7
A
153 157Right-handed 310
Helix 8
AA8
A
170 181Right-handed alpha
Helix 9
AA9
A
188 190Right-handed 310
Helix 10
AB1
A
191 200Right-handed alpha
Helix 11
AB2
A
249 271Right-handed alpha
Helix 12
AB3
A
273 277Right-handed 310
Helix 13
AB4
A
283 289Right-handed alpha
Helix 14
AB5
A
289 314Right-handed alpha
Helix 15
AB6
A
315 317Right-handed 310
Helix 16
AB7
A
318 324Right-handed alpha
Helix 17
AB8
A
325 334Right-handed alpha
Helix 18
AB9
A
334 341Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6EFX.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 82first strand
Strand 2
A
59 63parallel
Strand 3
A
31 35parallel
Strand 4
A
107 110parallel
Strand 5
A
138 141parallel
Strand 6
A
165 167parallel
Strand 7
A
204 207parallel
Strand 8
A
212 215anti-parallel
Strand 9
A
236 238anti-parallel
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