Analysis of interatomic Contacts of Structural Units in PDB entry:
6EG0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EG0 entry

There are 2 chains in PDB entry 6EG0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 43ASN 243
B
 PRO 36HIS 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6EG0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
120 124Right-handed 310
Helix 2
AA2
A
218 222Right-handed 310
Helix 3
AA3
B
116 120Right-handed 310
Helix 4
AA4
B
184 186Right-handed 310
Helix 5
AA5
B
210 214Right-handed 310
Helix 6
AA6
B
310 314Right-handed 310
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There are 12 sheets in PDB entry 6EG0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
62 70anti-parallel
Strand 3
A
111 117anti-parallel
Strand 4
A
101 104anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 58first strand
Strand 2
A
138 146parallel
Strand 3
A
125 131anti-parallel
Strand 4
A
77 81anti-parallel
Strand 5
A
86 90anti-parallel
Strand 6
A
93 94anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 152first strand
Strand 2
A
166 171anti-parallel
Strand 3
A
209 214anti-parallel
Strand 4
A
199 204anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 161first strand
Strand 2
A
235 242parallel
Strand 3
A
223 229anti-parallel
Strand 4
A
182 186anti-parallel
Strand 5
A
189 190anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 47first strand
Strand 2
B
60 67anti-parallel
Strand 3
B
107 112anti-parallel
Strand 4
B
98 103anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 55first strand
Strand 2
B
133 147parallel
Strand 3
B
121 127anti-parallel
Strand 4
B
74 78anti-parallel
Strand 5
B
83 87anti-parallel
Strand 6
B
90 91anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 55first strand
Strand 2
B
133 147parallel
Strand 3
B
170 173anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 159first strand
Strand 2
B
229 245parallel
Strand 3
B
215 222anti-parallel
Strand 4
B
177 182anti-parallel
Strand 5
B
199 200anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 159first strand
Strand 2
B
229 245parallel
Strand 3
B
258 267anti-parallel
Strand 4
B
299 306anti-parallel
Strand 5
B
289 294anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 167first strand
Strand 2
B
203 206anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
188 189first strand
Strand 2
B
195 196anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 252first strand
Strand 2
B
326 336parallel
Strand 3
B
315 323anti-parallel
Strand 4
B
271 276anti-parallel
Strand 5
B
280 281anti-parallel
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