Analysis of interatomic Contacts of Structural Units in PDB entry:
6EG7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EG7 entry

There are 2 chains in PDB entry 6EG7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 7PRO 285
B
PRO 7PHE 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6EG7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
23 33Right-handed alpha
Helix 3
AA3
A
34 48Right-handed alpha
Helix 4
AA4
A
53 78Right-handed alpha
Helix 5
AA5
A
86 88Right-handed 310
Helix 6
AA6
A
89 99Right-handed alpha
Helix 7
AA7
A
102 107Right-handed alpha
Helix 8
AA8
A
128 135Right-handed alpha
Helix 9
AA9
A
184 201Right-handed alpha
Helix 10
AB1
A
250 267Right-handed alpha
Helix 11
AB2
A
271 279Right-handed alpha
Helix 12
AB3
B
10 23Right-handed alpha
Helix 13
AB4
B
23 33Right-handed alpha
Helix 14
AB5
B
34 48Right-handed alpha
Helix 15
AB6
B
53 78Right-handed alpha
Helix 16
AB7
B
88 99Right-handed alpha
Helix 17
AB8
B
102 107Right-handed alpha
Helix 18
AB9
B
128 135Right-handed alpha
Helix 19
AC1
B
183 201Right-handed alpha
Helix 20
AC2
B
250 267Right-handed alpha
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There are 2 sheets in PDB entry 6EG7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
227 235first strand
Strand 2
A
205 214parallel
Strand 3
A
165 183parallel
Strand 4
A
138 157anti-parallel
Strand 5
A
112 124anti-parallel
Strand 6
A
165 183parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
227 234first strand
Strand 2
B
205 213parallel
Strand 3
B
165 182parallel
Strand 4
B
138 157anti-parallel
Strand 5
B
112 124anti-parallel
Strand 6
B
165 182parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il