Analysis of interatomic Contacts of Structural Units in PDB entry:
6EGU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6EGU entry

There are 3 chains in PDB entry 6EGU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 691	LYS 1136
B	CYS 691	ASN 1134
C	CYS 691	ASP 1122

There are 12 helices in PDB entry 6EGU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	797	801	Right-handed 310
Helix 2	AA2	A	820	824	Right-handed 310
Helix 3	AA3	A	936	942	Right-handed alpha
Helix 4	AA4	A	971	979	Right-handed alpha
Helix 5	AA5	B	797	801	Right-handed 310
Helix 6	AA6	B	820	824	Right-handed 310
Helix 7	AA7	B	936	943	Right-handed alpha
Helix 8	AA8	B	971	979	Right-handed alpha
Helix 9	AA9	C	797	801	Right-handed 310
Helix 10	AB1	C	820	824	Right-handed 310
Helix 11	AB2	C	936	942	Right-handed alpha
Helix 12	AB3	C	971	979	Right-handed alpha

There are 21 sheets in PDB entry 6EGU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	880	882	first strand
Strand 2	A	886	893	anti-parallel
Strand 3	A	1006	1016	anti-parallel
Strand 4	A	713	725	anti-parallel
Strand 5	A	695	704	anti-parallel
Strand 6	B	1018	1024	parallel
Strand 7	B	729	736	anti-parallel
Strand 8	B	742	764	anti-parallel
Strand 9	B	847	864	anti-parallel
Strand 10	B	904	908	anti-parallel
Strand 11	B	912	916	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	870	875	first strand
Strand 2	B	847	864	anti-parallel
Strand 3	B	742	764	anti-parallel
Strand 4	B	999	1002	anti-parallel
Strand 5	B	988	992	anti-parallel
Strand 6	B	983	985	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	870	875	first strand
Strand 2	A	847	864	anti-parallel
Strand 3	A	742	764	anti-parallel
Strand 4	A	999	1003	anti-parallel
Strand 5	A	988	992	anti-parallel
Strand 6	A	983	985	anti-parallel

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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	912	916	first strand
Strand 2	A	904	908	anti-parallel
Strand 3	A	847	864	anti-parallel
Strand 4	A	742	764	anti-parallel
Strand 5	A	729	736	anti-parallel
Strand 6	A	1018	1024	anti-parallel
Strand 7	C	695	704	parallel
Strand 8	C	714	725	anti-parallel
Strand 9	C	1006	1016	anti-parallel
Strand 10	C	886	893	anti-parallel
Strand 11	C	880	882	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	810	817	first strand
Strand 2	A	831	841	anti-parallel
Strand 3	A	767	776	anti-parallel
Strand 4	A	1131	1132	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	932	933	first strand
Strand 2	A	948	949	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	954	959	first strand
Strand 2	A	962	970	anti-parallel
Strand 3	A	1123	1129	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1029	1038	first strand
Strand 2	A	1046	1054	anti-parallel
Strand 3	A	1079	1086	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1070	1075	first strand
Strand 2	A	1058	1064	anti-parallel
Strand 3	A	1092	1100	anti-parallel
Strand 4	A	1106	1113	anti-parallel

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There are 11 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	880	883	first strand
Strand 2	B	886	893	anti-parallel
Strand 3	B	1006	1016	anti-parallel
Strand 4	B	713	725	anti-parallel
Strand 5	B	695	704	anti-parallel
Strand 6	C	1018	1024	parallel
Strand 7	C	729	736	anti-parallel
Strand 8	C	742	764	anti-parallel
Strand 9	C	847	864	anti-parallel
Strand 10	C	904	907	anti-parallel
Strand 11	C	913	916	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	870	875	first strand
Strand 2	C	847	864	anti-parallel
Strand 3	C	742	764	anti-parallel
Strand 4	C	999	1002	anti-parallel
Strand 5	C	988	992	anti-parallel
Strand 6	C	983	985	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	810	817	first strand
Strand 2	B	831	841	anti-parallel
Strand 3	B	767	776	anti-parallel
Strand 4	B	1131	1132	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	932	933	first strand
Strand 2	B	948	949	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	955	959	first strand
Strand 2	B	962	970	anti-parallel
Strand 3	B	1123	1129	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1029	1038	first strand
Strand 2	B	1046	1054	anti-parallel
Strand 3	B	1079	1086	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1070	1075	first strand
Strand 2	B	1058	1064	anti-parallel
Strand 3	B	1092	1100	anti-parallel
Strand 4	B	1106	1113	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	810	817	first strand
Strand 2	C	831	841	anti-parallel
Strand 3	C	767	776	anti-parallel
Strand 4	C	1131	1132	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	932	933	first strand
Strand 2	C	948	949	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	954	959	first strand
Strand 2	C	962	970	anti-parallel
Strand 3	C	1123	1129	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1029	1038	first strand
Strand 2	C	1046	1054	anti-parallel
Strand 3	C	1079	1086	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1070	1075	first strand
Strand 2	C	1058	1063	anti-parallel
Strand 3	C	1092	1100	anti-parallel
Strand 4	C	1106	1113	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6EGU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6EGU