Analysis of interatomic Contacts of Structural Units in PDB entry:
6EHD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EHD entry

There is 1 chain in PDB entry 6EHD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 1TRP 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 6EHD. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
89 95Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6EHD.

There are 19 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2 6first strand
Strand 2
A
30 31first strand
Strand 3
A
37 47first strand
Strand 4
A
50 59anti-parallel
Strand 5
A
67 77anti-parallel
Strand 6
A
80 88anti-parallel
Strand 7
A
117 128anti-parallel
Strand 8
A
131 138anti-parallel
Strand 9
A
147 157anti-parallel
Strand 10
A
160 181anti-parallel
Strand 11
A
184 205anti-parallel
Strand 12
A
208 221anti-parallel
Strand 13
A
227 242anti-parallel
Strand 14
A
245 258anti-parallel
Strand 15
A
263 278anti-parallel
Strand 16
A
281 299anti-parallel
Strand 17
A
304 325anti-parallel
Strand 18
A
9 24anti-parallel
Strand 19
A
30 31anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il