Analysis of interatomic Contacts of Structural Units in PDB entry:
6EHH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EHH entry

There are 4 chains in PDB entry 6EHH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 2SER 155
B
THR 3ASP 154
C
THR 3ASP 154
D
THR 3PHE 156
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6EHH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
44 58Right-handed alpha
Helix 2
AA2
A
112 116Right-handed 310
Helix 3
AA3
A
117 118Right-handed 310
Helix 4
AA4
A
119 129Right-handed alpha
Helix 5
AA5
B
44 58Right-handed alpha
Helix 6
AA6
B
112 116Right-handed 310
Helix 7
AA7
B
117 118Right-handed 310
Helix 8
AA8
B
119 129Right-handed alpha
Helix 9
AA9
C
44 58Right-handed alpha
Helix 10
AB1
C
109 111Right-handed 310
Helix 11
AB2
C
112 116Right-handed 310
Helix 12
AB3
C
117 118Right-handed 310
Helix 13
AB4
C
119 129Right-handed alpha
Helix 14
AB5
D
44 58Right-handed alpha
Helix 15
AB6
D
112 116Right-handed 310
Helix 16
AB7
D
117 118Right-handed 310
Helix 17
AB8
D
119 129Right-handed alpha
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There are 7 sheets in PDB entry 6EHH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
35 38first strand
Strand 2
A
4 12anti-parallel
Strand 3
A
80 88parallel
Strand 4
A
65 74anti-parallel
Strand 5
A
133 139parallel
Strand 6
A
145 152anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
17 23first strand
Strand 2
A
101 107anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
35 38first strand
Strand 2
B
4 12anti-parallel
Strand 3
B
80 88parallel
Strand 4
B
65 74anti-parallel
Strand 5
B
132 139parallel
Strand 6
B
145 153anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
17 23first strand
Strand 2
B
101 107anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
35 38first strand
Strand 2
C
4 12anti-parallel
Strand 3
C
80 88parallel
Strand 4
C
65 74anti-parallel
Strand 5
C
132 139parallel
Strand 6
C
145 153anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
17 23first strand
Strand 2
C
101 107anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
101 107first strand
Strand 2
D
17 23anti-parallel
Strand 3
D
4 14anti-parallel
Strand 4
D
80 88parallel
Strand 5
D
65 74anti-parallel
Strand 6
D
133 139parallel
Strand 7
D
145 152anti-parallel
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