Analysis of interatomic Contacts of Structural Units in PDB entry:
6EHX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EHX entry

There is 1 chain in PDB entry 6EHX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
GLN 1LYS 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 6EHX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
B
28 32Right-handed 310
Helix 2
AA2
B
87 91Right-handed 310
Helix 3
AA3
B
215 219Right-handed 310
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There are 6 sheets in PDB entry 6EHX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3 7first strand
Strand 2
B
18 25anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
69 73anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 12first strand
Strand 2
B
115 119parallel
Strand 3
B
92 99anti-parallel
Strand 4
B
33 40anti-parallel
Strand 5
B
44 52anti-parallel
Strand 6
B
57 60anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 12first strand
Strand 2
B
115 119parallel
Strand 3
B
92 99anti-parallel
Strand 4
B
110 111anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
140 143first strand
Strand 2
B
155 161anti-parallel
Strand 3
B
206 211anti-parallel
Strand 4
B
198 203anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
146 149first strand
Strand 2
B
238 242parallel
Strand 3
B
220 226anti-parallel
Strand 4
B
169 174anti-parallel
Strand 5
B
181 185anti-parallel
Strand 6
B
189 190anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
146 149first strand
Strand 2
B
238 242parallel
Strand 3
B
220 226anti-parallel
Strand 4
B
233 234anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il