Analysis of interatomic Contacts of Structural Units in PDB entry:
6EI6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EI6 entry

There are 2 chains in PDB entry 6EI6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 575ALA 816
B
 CYS 575ALA 816
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6EI6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
579 609Right-handed alpha
Helix 2
AA2
A
611 638Right-handed alpha
Helix 3
AA3
A
653 657Right-handed 310
Helix 4
AA4
A
727 737Right-handed alpha
Helix 5
AA5
A
764 768Right-handed 310
Helix 6
AA6
A
800 810Right-handed alpha
Helix 7
AA7
B
579 609Right-handed alpha
Helix 8
AA8
B
611 638Right-handed alpha
Helix 9
AA9
B
653 657Right-handed 310
Helix 10
AB1
B
727 737Right-handed alpha
Helix 11
AB2
B
764 768Right-handed 310
Helix 12
AB3
B
800 810Right-handed alpha
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There are 6 sheets in PDB entry 6EI6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
645 648first strand
Strand 2
A
811 814anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
717 722first strand
Strand 2
A
665 674anti-parallel
Strand 3
A
784 795anti-parallel
Strand 4
A
771 779anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
701 703first strand
Strand 2
A
686 691anti-parallel
Strand 3
A
738 745anti-parallel
Strand 4
A
754 762anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
645 648first strand
Strand 2
B
811 814anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
717 722first strand
Strand 2
B
665 674anti-parallel
Strand 3
B
784 795anti-parallel
Strand 4
B
771 779anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
699 703first strand
Strand 2
B
686 693anti-parallel
Strand 3
B
738 745anti-parallel
Strand 4
B
754 762anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il