Analysis of interatomic Contacts of Structural Units in PDB entry:
6EI9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EI9 entry

There are 2 chains in PDB entry 6EI9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -3ALA 321
B
 LEU -5ASN 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6EI9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 32Right-handed alpha
Helix 2
AA2
A
75 89Right-handed alpha
Helix 3
AA3
A
111 116Right-handed 310
Helix 4
AA4
A
117 130Right-handed alpha
Helix 5
AA5
A
150 162Right-handed alpha
Helix 6
AA6
A
172 176Right-handed 310
Helix 7
AA7
A
183 193Right-handed alpha
Helix 8
AA8
A
205 217Right-handed alpha
Helix 9
AA9
A
224 228Right-handed 310
Helix 10
AB1
A
232 244Right-handed alpha
Helix 11
AB2
A
251 269Right-handed alpha
Helix 12
AB3
A
270 291Right-handed alpha
Helix 13
AB4
A
294 303Right-handed alpha
Helix 14
AB5
A
305 318Right-handed alpha
Helix 15
AB6
B
22 32Right-handed alpha
Helix 16
AB7
B
75 89Right-handed alpha
Helix 17
AB8
B
111 116Right-handed 310
Helix 18
AB9
B
117 130Right-handed alpha
Helix 19
AC1
B
150 162Right-handed alpha
Helix 20
AC2
B
183 193Right-handed alpha
Helix 21
AC3
B
205 217Right-handed alpha
Helix 22
AC4
B
224 228Right-handed 310
Helix 23
AC5
B
232 244Right-handed alpha
Helix 24
AC6
B
251 269Right-handed alpha
Helix 25
AC7
B
274 291Right-handed alpha
Helix 26
AC8
B
295 303Right-handed alpha
Helix 27
AC9
B
305 317Right-handed alpha
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There are 6 sheets in PDB entry 6EI9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1 3first strand
Strand 2
A
6 8anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 14first strand
Strand 2
A
36 40parallel
Strand 3
A
68 71parallel
Strand 4
A
93 98parallel
Strand 5
A
136 141parallel
Strand 6
A
166 169parallel
Strand 7
A
197 200parallel
Strand 8
A
220 223parallel
Strand 9
A
12 14parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 105first strand
Strand 2
A
108 110anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 3first strand
Strand 2
B
6 7anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 14first strand
Strand 2
B
36 40parallel
Strand 3
B
68 71parallel
Strand 4
B
93 98parallel
Strand 5
B
136 141parallel
Strand 6
B
166 169parallel
Strand 7
B
197 200parallel
Strand 8
B
220 223parallel
Strand 9
B
12 14parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 105first strand
Strand 2
B
108 110anti-parallel
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