Analysis of interatomic Contacts of Structural Units in PDB entry:
6EIC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EIC entry

There are 3 chains in PDB entry 6EIC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1LEU 279
A
 THR 2ARG 278
B
 MET 1LEU 279
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 6EIC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
13 15Right-handed 310
Helix 2
AA2
C
42 45Right-handed 310
Helix 3
AA3
C
46 56Right-handed alpha
Helix 4
AA4
C
80 99Right-handed alpha
Helix 5
AA5
C
110 123Right-handed alpha
Helix 6
AA6
C
145 158Right-handed alpha
Helix 7
AA7
C
167 171Right-handed 310
Helix 8
AA8
C
174 183Right-handed alpha
Helix 9
AA9
C
194 211Right-handed alpha
Helix 10
AB1
C
212 214Right-handed 310
Helix 11
AB2
C
230 241Right-handed alpha
Helix 12
AB3
C
263 277Right-handed alpha
Helix 13
AB4
A
13 15Right-handed 310
Helix 14
AB5
A
42 45Right-handed 310
Helix 15
AB6
A
46 56Right-handed alpha
Helix 16
AB7
A
80 99Right-handed alpha
Helix 17
AB8
A
110 123Right-handed alpha
Helix 18
AB9
A
144 158Right-handed alpha
Helix 19
AC1
A
167 171Right-handed 310
Helix 20
AC2
A
174 183Right-handed alpha
Helix 21
AC3
A
194 205Right-handed alpha
Helix 22
AC4
A
210 214Right-handed 310
Helix 23
AC5
A
231 241Right-handed alpha
Helix 24
AC6
A
263 277Right-handed alpha
Helix 25
AC7
B
13 15Right-handed 310
Helix 26
AC8
B
42 45Right-handed 310
Helix 27
AC9
B
46 56Right-handed alpha
Helix 28
AD1
B
80 99Right-handed alpha
Helix 29
AD2
B
110 123Right-handed alpha
Helix 30
AD3
B
144 158Right-handed alpha
Helix 31
AD4
B
167 172Right-handed 310
Helix 32
AD5
B
174 184Right-handed alpha
Helix 33
AD6
B
194 206Right-handed alpha
Helix 34
AD7
B
206 211Right-handed alpha
Helix 35
AD8
B
212 214Right-handed 310
Helix 36
AD9
B
230 241Right-handed alpha
Helix 37
AE1
B
263 277Right-handed alpha
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There are 6 sheets in PDB entry 6EIC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 11first strand
Strand 2
C
17 25anti-parallel
Strand 3
C
58 63anti-parallel
Strand 4
C
31 36parallel
Strand 5
C
103 109parallel
Strand 6
C
129 133parallel
Strand 7
C
218 223parallel
Strand 8
C
246 251parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 164first strand
Strand 2
C
192 193anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 11first strand
Strand 2
A
17 25anti-parallel
Strand 3
A
58 63anti-parallel
Strand 4
A
31 36parallel
Strand 5
A
103 109parallel
Strand 6
A
129 133parallel
Strand 7
A
218 223parallel
Strand 8
A
246 251parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 164first strand
Strand 2
A
192 193anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 11first strand
Strand 2
B
17 25anti-parallel
Strand 3
B
58 63anti-parallel
Strand 4
B
31 36parallel
Strand 5
B
103 109parallel
Strand 6
B
129 133parallel
Strand 7
B
218 223parallel
Strand 8
B
246 251parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 164first strand
Strand 2
B
192 193anti-parallel
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