Analysis of interatomic Contacts of Structural Units in PDB entry:
6EIG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EIG entry

There are 4 chains in PDB entry 6EIG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 26SER 256
A
 ASN 258ILE 281
B
 SER 26SER 256
B
 ASN 258ILE 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6EIG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 41Right-handed 310
Helix 2
AA2
A
45 73Right-handed alpha
Helix 3
AA3
A
81 100Right-handed alpha
Helix 4
AA4
A
117 137Right-handed alpha
Helix 5
AA5
A
146 169Right-handed alpha
Helix 6
AA6
A
172 203Right-handed alpha
Helix 7
AA7
A
206 233Right-handed alpha
Helix 8
AA8
A
241 257Right-handed alpha
Helix 9
AA9
A
257 275Right-handed alpha
Helix 10
AB1
B
36 41Right-handed alpha
Helix 11
AB2
B
45 74Right-handed alpha
Helix 12
AB3
B
82 101Right-handed alpha
Helix 13
AB4
B
117 136Right-handed alpha
Helix 14
AB5
B
146 169Right-handed alpha
Helix 15
AB6
B
171 203Right-handed alpha
Helix 16
AB7
B
206 233Right-handed alpha
Helix 17
AB8
B
241 257Right-handed alpha
Helix 18
AB9
B
257 279Right-handed alpha
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There are 2 sheets in PDB entry 6EIG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
115 116anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 109first strand
Strand 2
B
115 116anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il