Analysis of interatomic Contacts of Structural Units in PDB entry:
6EIO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EIO entry

There is 1 chain in PDB entry 6EIO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 38HIS 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 6EIO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 56Right-handed 310
Helix 2
AA2
A
102 122Right-handed alpha
Helix 3
AA3
A
192 194Right-handed 310
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There are 4 sheets in PDB entry 6EIO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 95first strand
Strand 2
A
73 75parallel
Strand 3
A
247 249parallel
Strand 4
A
229 236parallel
Strand 5
A
58 62parallel
Strand 6
A
77 80parallel
Strand 7
A
98 100parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 95first strand
Strand 2
A
73 75parallel
Strand 3
A
247 249parallel
Strand 4
A
229 236parallel
Strand 5
A
211 218parallel
Strand 6
A
196 200parallel
Strand 7
A
169 173parallel
Strand 8
A
142 146parallel
Strand 9
A
128 129parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
65 69parallel
Strand 3
A
241 244parallel
Strand 4
A
222 224parallel
Strand 5
A
204 206parallel
Strand 6
A
177 179parallel
Strand 7
A
150 152parallel
Strand 8
A
132 133parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
157 160parallel
Strand 3
A
185 188parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il