Analysis of interatomic Contacts of Structural Units in PDB entry:
6ELQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ELQ entry

There are 3 chains in PDB entry 6ELQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
X	SER 4	LEU 633
A	SER 4	LEU 633
B	SER 4	LEU 633

There are 96 helices in PDB entry 6ELQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	X	11	22	Right-handed alpha
Helix 2	AA2	X	26	33	Right-handed alpha
Helix 3	AA3	X	38	44	Right-handed alpha
Helix 4	AA4	X	72	108	Right-handed alpha
Helix 5	AA5	X	117	128	Right-handed alpha
Helix 6	AA6	X	136	154	Right-handed alpha
Helix 7	AA7	X	160	165	Right-handed alpha
Helix 8	AA8	X	168	179	Right-handed alpha
Helix 9	AA9	X	184	196	Right-handed alpha
Helix 10	AB1	X	203	221	Right-handed alpha
Helix 11	AB2	X	222	235	Right-handed alpha
Helix 12	AB3	X	245	249	Right-handed 310
Helix 13	AB4	X	262	276	Right-handed alpha
Helix 14	AB5	X	276	283	Right-handed alpha
Helix 15	AB6	X	294	305	Right-handed alpha
Helix 16	AB7	X	311	313	Right-handed 310
Helix 17	AB8	X	314	321	Right-handed alpha
Helix 18	AB9	X	337	344	Right-handed alpha
Helix 19	AC1	X	370	387	Right-handed alpha
Helix 20	AC2	X	388	389	Right-handed 310
Helix 21	AC3	X	390	394	Right-handed 310
Helix 22	AC4	X	408	418	Right-handed alpha
Helix 23	AC5	X	424	435	Right-handed alpha
Helix 24	AC6	X	454	467	Right-handed alpha
Helix 25	AC7	X	474	484	Right-handed alpha
Helix 26	AC8	X	488	495	Right-handed 310
Helix 27	AC9	X	496	510	Right-handed alpha
Helix 28	AD1	X	527	542	Right-handed alpha
Helix 29	AD2	X	545	549	Right-handed 310
Helix 30	AD3	X	560	573	Right-handed alpha
Helix 31	AD4	X	588	597	Right-handed alpha
Helix 32	AD5	X	597	604	Right-handed alpha
Helix 33	AD6	X	612	631	Right-handed alpha
Helix 34	AD7	A	11	22	Right-handed alpha
Helix 35	AD8	A	26	35	Right-handed alpha
Helix 36	AD9	A	38	44	Right-handed alpha
Helix 37	AE1	A	72	108	Right-handed alpha
Helix 38	AE2	A	117	128	Right-handed alpha
Helix 39	AE3	A	136	152	Right-handed alpha
Helix 40	AE4	A	160	165	Right-handed alpha
Helix 41	AE5	A	168	179	Right-handed alpha
Helix 42	AE6	A	184	196	Right-handed alpha
Helix 43	AE7	A	203	221	Right-handed alpha
Helix 44	AE8	A	222	235	Right-handed alpha
Helix 45	AE9	A	245	249	Right-handed 310
Helix 46	AF1	A	262	276	Right-handed alpha
Helix 47	AF2	A	276	283	Right-handed alpha
Helix 48	AF3	A	294	305	Right-handed alpha
Helix 49	AF4	A	314	321	Right-handed alpha
Helix 50	AF5	A	337	344	Right-handed alpha
Helix 51	AF6	A	370	387	Right-handed alpha
Helix 52	AF7	A	388	389	Right-handed 310
Helix 53	AF8	A	390	394	Right-handed 310
Helix 54	AF9	A	408	418	Right-handed alpha
Helix 55	AG1	A	425	435	Right-handed alpha
Helix 56	AG2	A	454	467	Right-handed alpha
Helix 57	AG3	A	474	484	Right-handed alpha
Helix 58	AG4	A	488	495	Right-handed 310
Helix 59	AG5	A	496	508	Right-handed alpha
Helix 60	AG6	A	509	511	Right-handed 310
Helix 61	AG7	A	527	542	Right-handed alpha
Helix 62	AG8	A	545	549	Right-handed 310
Helix 63	AG9	A	560	573	Right-handed alpha
Helix 64	AH1	A	588	597	Right-handed alpha
Helix 65	AH2	A	597	604	Right-handed alpha
Helix 66	AH3	A	612	632	Right-handed alpha
Helix 67	AH4	B	11	22	Right-handed alpha
Helix 68	AH5	B	26	35	Right-handed alpha
Helix 69	AH6	B	38	44	Right-handed alpha
Helix 70	AH7	B	72	108	Right-handed alpha
Helix 71	AH8	B	117	128	Right-handed alpha
Helix 72	AH9	B	136	154	Right-handed alpha
Helix 73	AI1	B	160	165	Right-handed alpha
Helix 74	AI2	B	168	177	Right-handed alpha
Helix 75	AI3	B	184	196	Right-handed alpha
Helix 76	AI4	B	203	222	Right-handed alpha
Helix 77	AI5	B	222	235	Right-handed alpha
Helix 78	AI6	B	245	249	Right-handed 310
Helix 79	AI7	B	262	275	Right-handed alpha
Helix 80	AI8	B	276	282	Right-handed alpha
Helix 81	AI9	B	294	305	Right-handed alpha
Helix 82	AJ1	B	314	321	Right-handed alpha
Helix 83	AJ2	B	336	345	Right-handed alpha
Helix 84	AJ3	B	367	369	Right-handed 310
Helix 85	AJ4	B	370	387	Right-handed alpha
Helix 86	AJ5	B	408	418	Right-handed alpha
Helix 87	AJ6	B	424	434	Right-handed alpha
Helix 88	AJ7	B	454	467	Right-handed alpha
Helix 89	AJ8	B	474	484	Right-handed alpha
Helix 90	AJ9	B	488	494	Right-handed 310
Helix 91	AK1	B	496	511	Right-handed alpha
Helix 92	AK2	B	527	542	Right-handed alpha
Helix 93	AK3	B	560	573	Right-handed alpha
Helix 94	AK4	B	588	597	Right-handed alpha
Helix 95	AK5	B	598	603	Right-handed alpha
Helix 96	AK6	B	612	631	Right-handed alpha

There are 12 sheets in PDB entry 6ELQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	46	47	first strand
Strand 2	X	55	56	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	240	244	first strand
Strand 2	X	401	405	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	308	310	first strand
Strand 2	X	288	293	parallel
Strand 3	X	254	259	parallel
Strand 4	X	326	329	parallel
Strand 5	X	348	351	parallel
Strand 6	X	362	363	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	519	521	first strand
Strand 2	X	470	473	parallel
Strand 3	X	440	443	parallel
Strand 4	X	551	555	parallel
Strand 5	X	577	579	parallel
Strand 6	X	607	609	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	A	55	56	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	244	first strand
Strand 2	A	401	405	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	310	first strand
Strand 2	A	288	293	parallel
Strand 3	A	254	259	parallel
Strand 4	A	324	329	parallel
Strand 5	A	348	351	parallel
Strand 6	A	362	363	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	519	521	first strand
Strand 2	A	469	473	parallel
Strand 3	A	439	443	parallel
Strand 4	A	551	555	parallel
Strand 5	A	577	579	parallel
Strand 6	A	607	609	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	47	first strand
Strand 2	B	55	56	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	244	first strand
Strand 2	B	401	405	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	310	first strand
Strand 2	B	288	293	parallel
Strand 3	B	254	260	parallel
Strand 4	B	324	329	parallel
Strand 5	B	348	351	parallel
Strand 6	B	362	363	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	519	521	first strand
Strand 2	B	469	473	parallel
Strand 3	B	439	443	parallel
Strand 4	B	552	555	parallel
Strand 5	B	576	579	parallel
Strand 6	B	606	609	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ELQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ELQ