Analysis of interatomic Contacts of Structural Units in PDB entry:
6ELS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ELS entry

There is 1 chain in PDB entry 6ELS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 32SER 504
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6ELS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 53Right-handed 310
Helix 2
AA2
A
54 71Right-handed alpha
Helix 3
AA3
A
78 91Right-handed alpha
Helix 4
AA4
A
111 131Right-handed alpha
Helix 5
AA5
A
145 149Right-handed 310
Helix 6
AA6
A
152 157Right-handed alpha
Helix 7
AA7
A
189 206Right-handed alpha
Helix 8
AA8
A
211 217Right-handed alpha
Helix 9
AA9
A
231 236Right-handed alpha
Helix 10
AB1
A
237 246Right-handed alpha
Helix 11
AB2
A
261 265Right-handed 310
Helix 12
AB3
A
266 284Right-handed alpha
Helix 13
AB4
A
294 299Right-handed alpha
Helix 14
AB5
A
317 320Right-handed 310
Helix 15
AB6
A
321 325Right-handed 310
Helix 16
AB7
A
343 348Right-handed 310
Helix 17
AB8
A
361 366Right-handed alpha
Helix 18
AB9
A
372 376Right-handed 310
Helix 19
AC1
A
397 404Right-handed alpha
Helix 20
AC2
A
467 474Right-handed alpha
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There are 5 sheets in PDB entry 6ELS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
311 315parallel
Strand 3
A
301 305anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 47first strand
Strand 2
A
327 329parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 370first strand
Strand 2
A
384 389parallel
Strand 3
A
481 490anti-parallel
Strand 4
A
421 427anti-parallel
Strand 5
A
442 448anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 379first strand
Strand 2
A
494 495anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
458 466first strand
Strand 2
A
405 416anti-parallel
Strand 3
A
497 503anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il