Analysis of interatomic Contacts of Structural Units in PDB entry:
6EMR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EMR entry

There is 1 chain in PDB entry 6EMR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 339ASP 548
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6EMR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
347 362Right-handed alpha
Helix 2
AA2
A
369 383Right-handed alpha
Helix 3
AA3
A
386 391Right-handed alpha
Helix 4
AA4
A
393 404Right-handed alpha
Helix 5
AA5
A
409 428Right-handed alpha
Helix 6
AA6
A
468 477Right-handed alpha
Helix 7
AA7
A
481 485Right-handed 310
Helix 8
AA8
A
492 496Right-handed 310
Helix 9
AA9
A
511 516Right-handed alpha
Helix 10
AB1
A
527 540Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6EMR.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 364first strand
Strand 2
A
367 368anti-parallel
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