Analysis of interatomic Contacts of Structural Units in PDB entry:
6EMT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EMT entry

There is 1 chain in PDB entry 6EMT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 97GLN 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6EMT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
107 111Right-handed 310
Helix 2
AA2
A
112 134Right-handed alpha
Helix 3
AA3
A
145 150Right-handed alpha
Helix 4
AA4
A
165 173Right-handed alpha
Helix 5
AA5
A
190 194Right-handed 310
Helix 6
AA6
A
217 225Right-handed alpha
Helix 7
AA7
A
246 259Right-handed alpha
Helix 8
AA8
A
263 271Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6EMT.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 161first strand
Strand 2
A
139 142parallel
Strand 3
A
100 104parallel
Strand 4
A
198 202parallel
Strand 5
A
177 181parallel
Strand 6
A
228 233parallel
Strand 7
A
187 188parallel
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