Analysis of interatomic Contacts of Structural Units in PDB entry:
6ENE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ENE entry

There are 3 chains in PDB entry 6ENE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1PHE 329
B
 ALA 1PHE 329
C
 ALA 1PHE 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6ENE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
86 88Right-handed 310
Helix 2
AA2
A
100 105Right-handed alpha
Helix 3
AA3
A
106 108Right-handed 310
Helix 4
AA4
A
160 164Right-handed 310
Helix 5
AA5
A
193 198Right-handed 310
Helix 6
AA6
B
26 30Right-handed 310
Helix 7
AA7
B
100 105Right-handed alpha
Helix 8
AA8
B
106 108Right-handed 310
Helix 9
AA9
B
160 164Right-handed 310
Helix 10
AB1
B
193 198Right-handed 310
Helix 11
AB2
C
100 105Right-handed alpha
Helix 12
AB3
C
106 108Right-handed 310
Helix 13
AB4
C
138 143Right-handed alpha
Helix 14
AB5
C
160 164Right-handed 310
Helix 15
AB6
C
192 197Right-handed alpha
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There are 4 sheets in PDB entry 6ENE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 18 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
9 24anti-parallel
Strand 3
A
320 329anti-parallel
Strand 4
A
296 305anti-parallel
Strand 5
A
276 293anti-parallel
Strand 6
A
258 272anti-parallel
Strand 7
A
238 252anti-parallel
Strand 8
A
220 235anti-parallel
Strand 9
A
205 217anti-parallel
Strand 10
A
180 190anti-parallel
Strand 11
A
168 177anti-parallel
Strand 12
A
146 153anti-parallel
Strand 13
A
127 137anti-parallel
Strand 14
A
90 97anti-parallel
Strand 15
A
75 84anti-parallel
Strand 16
A
50 61anti-parallel
Strand 17
A
35 47anti-parallel
Strand 18
A
9 24anti-parallel
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There are 19 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 6first strand
Strand 2
B
31 32first strand
Strand 3
B
35 47first strand
Strand 4
B
50 61anti-parallel
Strand 5
B
75 84anti-parallel
Strand 6
B
90 97anti-parallel
Strand 7
B
127 137anti-parallel
Strand 8
B
146 153anti-parallel
Strand 9
B
168 177anti-parallel
Strand 10
B
180 190anti-parallel
Strand 11
B
205 217anti-parallel
Strand 12
B
220 235anti-parallel
Strand 13
B
238 252anti-parallel
Strand 14
B
258 272anti-parallel
Strand 15
B
276 293anti-parallel
Strand 16
B
296 305anti-parallel
Strand 17
B
320 329anti-parallel
Strand 18
B
9 23anti-parallel
Strand 19
B
31 32anti-parallel
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There are 19 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 6first strand
Strand 2
C
31 32first strand
Strand 3
C
35 47first strand
Strand 4
C
50 61anti-parallel
Strand 5
C
75 85anti-parallel
Strand 6
C
90 97anti-parallel
Strand 7
C
127 137anti-parallel
Strand 8
C
146 153anti-parallel
Strand 9
C
168 177anti-parallel
Strand 10
C
180 190anti-parallel
Strand 11
C
205 217anti-parallel
Strand 12
C
220 230anti-parallel
Strand 13
C
242 252anti-parallel
Strand 14
C
258 272anti-parallel
Strand 15
C
276 293anti-parallel
Strand 16
C
296 305anti-parallel
Strand 17
C
320 329anti-parallel
Strand 18
C
9 23anti-parallel
Strand 19
C
31 32anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
234 235first strand
Strand 2
C
238 239anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il