Analysis of interatomic Contacts of Structural Units in PDB entry:
6EOA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EOA entry

There is 1 chain in PDB entry 6EOA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 32ASP 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 6EOA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 48Right-handed 310
Helix 2
AA2
A
49 60Right-handed alpha
Helix 3
AA3
A
71 76Right-handed 310
Helix 4
AA4
A
78 90Right-handed alpha
Helix 5
AA5
A
99 103Right-handed 310
Helix 6
AA6
A
107 112Right-handed alpha
Helix 7
AA7
A
122 131Right-handed alpha
Helix 8
AA8
A
140 150Right-handed alpha
Helix 9
AA9
A
154 163Right-handed alpha
Helix 10
AB1
A
176 181Right-handed alpha
Helix 11
AB2
A
182 195Right-handed alpha
Helix 12
AB3
A
221 238Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 6EOA.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 106first strand
Strand 2
A
63 69parallel
Strand 3
A
35 41parallel
Strand 4
A
133 139parallel
Strand 5
A
169 173parallel
Strand 6
A
199 200parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il