Analysis of interatomic Contacts of Structural Units in PDB entry:
6EOM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EOM entry

There is 1 chain in PDB entry 6EOM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 32GLY 555
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6EOM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 37Right-handed alpha
Helix 2
AA2
A
47 51Right-handed 310
Helix 3
AA3
A
52 78Right-handed alpha
Helix 4
AA4
A
80 91Right-handed alpha
Helix 5
AA5
A
93 107Right-handed alpha
Helix 6
AA6
A
137 148Right-handed alpha
Helix 7
AA7
A
151 156Right-handed alpha
Helix 8
AA8
A
174 178Right-handed alpha
Helix 9
AA9
A
178 196Right-handed alpha
Helix 10
AB1
A
198 215Right-handed alpha
Helix 11
AB2
A
217 226Right-handed alpha
Helix 12
AB3
A
261 269Right-handed alpha
Helix 13
AB4
A
271 273Right-handed 310
Helix 14
AB5
A
274 281Right-handed alpha
Helix 15
AB6
A
285 289Right-handed 310
Helix 16
AB7
A
311 313Right-handed 310
Helix 17
AB8
A
325 332Right-handed alpha
Helix 18
AB9
A
340 350Right-handed alpha
Helix 19
AC1
A
350 359Right-handed alpha
Helix 20
AC2
A
363 367Right-handed 310
Helix 21
AC3
A
368 384Right-handed alpha
Helix 22
AC4
A
399 404Right-handed alpha
Helix 23
AC5
A
406 429Right-handed alpha
Helix 24
AC6
A
435 452Right-handed alpha
Helix 25
AC7
A
453 455Right-handed 310
Helix 26
AC8
A
458 474Right-handed alpha
Helix 27
AC9
A
492 510Right-handed alpha
Helix 28
AD1
A
512 524Right-handed alpha
Helix 29
AD2
A
527 537Right-handed alpha
Helix 30
AD3
A
549 555Right-handed alpha
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There are 5 sheets in PDB entry 6EOM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 44first strand
Strand 2
A
543 548parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 165first strand
Strand 2
A
168 173anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 238first strand
Strand 2
A
253 260anti-parallel
Strand 3
A
299 309anti-parallel
Strand 4
A
335 339parallel
Strand 5
A
319 322anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 392first strand
Strand 2
A
395 398anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
477 480first strand
Strand 2
A
485 488anti-parallel
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