Analysis of interatomic Contacts of Structural Units in PDB entry:
6EOW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6EOW entry

There are 4 chains in PDB entry 6EOW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 8	GLU 348
B	VAL 9	GLU 348
C	GLN 8	GLU 348
D	VAL 9	TYR 293

There are 60 helices in PDB entry 6EOW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	27	Right-handed 310
Helix 2	AA2	A	57	65	Right-handed 310
Helix 3	AA3	A	131	137	Right-handed 310
Helix 4	AA4	A	140	154	Right-handed alpha
Helix 5	AA5	A	171	183	Right-handed alpha
Helix 6	AA6	A	192	202	Right-handed alpha
Helix 7	AA7	A	212	214	Right-handed 310
Helix 8	AA8	A	216	225	Right-handed alpha
Helix 9	AA9	A	237	245	Right-handed alpha
Helix 10	AB1	A	259	263	Right-handed 310
Helix 11	AB2	A	275	280	Right-handed alpha
Helix 12	AB3	A	288	294	Right-handed 310
Helix 13	AB4	A	295	309	Right-handed alpha
Helix 14	AB5	A	324	332	Right-handed alpha
Helix 15	AB6	A	333	335	Right-handed 310
Helix 16	AB7	B	25	27	Right-handed 310
Helix 17	AB8	B	57	65	Right-handed 310
Helix 18	AB9	B	131	137	Right-handed 310
Helix 19	AC1	B	140	154	Right-handed alpha
Helix 20	AC2	B	171	183	Right-handed alpha
Helix 21	AC3	B	192	202	Right-handed alpha
Helix 22	AC4	B	212	214	Right-handed 310
Helix 23	AC5	B	216	225	Right-handed alpha
Helix 24	AC6	B	237	245	Right-handed alpha
Helix 25	AC7	B	259	263	Right-handed 310
Helix 26	AC8	B	275	280	Right-handed alpha
Helix 27	AC9	B	288	294	Right-handed 310
Helix 28	AD1	B	295	309	Right-handed alpha
Helix 29	AD2	B	324	332	Right-handed alpha
Helix 30	AD3	B	333	335	Right-handed 310
Helix 31	AD4	C	25	27	Right-handed 310
Helix 32	AD5	C	57	65	Right-handed 310
Helix 33	AD6	C	131	137	Right-handed 310
Helix 34	AD7	C	140	154	Right-handed alpha
Helix 35	AD8	C	171	183	Right-handed alpha
Helix 36	AD9	C	192	202	Right-handed alpha
Helix 37	AE1	C	212	214	Right-handed 310
Helix 38	AE2	C	216	225	Right-handed alpha
Helix 39	AE3	C	237	245	Right-handed alpha
Helix 40	AE4	C	259	263	Right-handed 310
Helix 41	AE5	C	275	280	Right-handed alpha
Helix 42	AE6	C	288	294	Right-handed 310
Helix 43	AE7	C	295	309	Right-handed alpha
Helix 44	AE8	C	324	331	Right-handed alpha
Helix 45	AE9	C	332	335	Right-handed 310
Helix 46	AF1	D	25	27	Right-handed 310
Helix 47	AF2	D	57	65	Right-handed 310
Helix 48	AF3	D	131	137	Right-handed 310
Helix 49	AF4	D	140	154	Right-handed alpha
Helix 50	AF5	D	171	183	Right-handed alpha
Helix 51	AF6	D	192	202	Right-handed alpha
Helix 52	AF7	D	212	214	Right-handed 310
Helix 53	AF8	D	216	225	Right-handed alpha
Helix 54	AF9	D	237	245	Right-handed alpha
Helix 55	AG1	D	259	263	Right-handed 310
Helix 56	AG2	D	275	280	Right-handed alpha
Helix 57	AG3	D	288	294	Right-handed 310
Helix 58	AG4	D	295	309	Right-handed alpha
Helix 59	AG5	D	324	332	Right-handed alpha
Helix 60	AG6	D	333	335	Right-handed 310

There are 15 sheets in PDB entry 6EOW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	16	first strand
Strand 2	A	29	36	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	116	first strand
Strand 2	A	47	55	anti-parallel
Strand 3	A	83	93	anti-parallel
Strand 4	A	103	109	anti-parallel
Strand 5	A	123	124	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	116	first strand
Strand 2	A	47	55	anti-parallel
Strand 3	A	340	344	anti-parallel
Strand 4	A	316	320	parallel

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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	210	first strand
Strand 2	A	185	190	parallel
Strand 3	A	161	164	parallel
Strand 4	A	229	234	parallel
Strand 5	A	248	256	parallel
Strand 6	A	283	286	parallel
Strand 7	B	283	286	anti-parallel
Strand 8	B	248	256	parallel
Strand 9	B	229	234	parallel
Strand 10	B	161	164	parallel
Strand 11	B	185	190	parallel
Strand 12	B	207	210	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	16	first strand
Strand 2	B	29	35	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	113	116	first strand
Strand 2	B	47	55	anti-parallel
Strand 3	B	83	93	anti-parallel
Strand 4	B	103	109	anti-parallel
Strand 5	B	123	124	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	113	116	first strand
Strand 2	B	47	55	anti-parallel
Strand 3	B	340	344	anti-parallel
Strand 4	B	316	320	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	9	16	first strand
Strand 2	C	29	36	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	113	115	first strand
Strand 2	C	48	55	anti-parallel
Strand 3	C	83	92	anti-parallel
Strand 4	C	103	109	anti-parallel
Strand 5	C	123	124	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	113	115	first strand
Strand 2	C	48	55	anti-parallel
Strand 3	C	340	344	anti-parallel
Strand 4	C	316	320	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	210	first strand
Strand 2	C	185	190	parallel
Strand 3	C	161	164	parallel
Strand 4	C	229	234	parallel
Strand 5	C	248	256	parallel
Strand 6	C	283	286	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	16	first strand
Strand 2	D	29	35	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	113	116	first strand
Strand 2	D	47	55	anti-parallel
Strand 3	D	83	93	anti-parallel
Strand 4	D	103	109	anti-parallel
Strand 5	D	123	124	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	113	116	first strand
Strand 2	D	47	55	anti-parallel
Strand 3	D	340	344	anti-parallel
Strand 4	D	316	320	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	207	210	first strand
Strand 2	D	185	190	parallel
Strand 3	D	161	164	parallel
Strand 4	D	229	234	parallel
Strand 5	D	248	256	parallel
Strand 6	D	283	286	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6EOW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6EOW