Analysis of interatomic Contacts of Structural Units in PDB entry:
6EP3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EP3 entry

There are 2 chains in PDB entry 6EP3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3GLU 217
B
 ASN 3HIS 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6EP3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 22Right-handed alpha
Helix 2
AA2
A
32 41Right-handed alpha
Helix 3
AA3
A
43 57Right-handed alpha
Helix 4
AA4
A
76 102Right-handed alpha
Helix 5
AA5
A
106 124Right-handed alpha
Helix 6
AA6
A
125 143Right-handed alpha
Helix 7
AA7
A
146 164Right-handed alpha
Helix 8
AA8
A
165 171Right-handed 310
Helix 9
AA9
A
172 193Right-handed alpha
Helix 10
AB1
A
194 216Right-handed alpha
Helix 11
AB2
B
7 22Right-handed alpha
Helix 12
AB3
B
32 41Right-handed alpha
Helix 13
AB4
B
43 57Right-handed alpha
Helix 14
AB5
B
76 102Right-handed alpha
Helix 15
AB6
B
106 124Right-handed alpha
Helix 16
AB7
B
125 143Right-handed alpha
Helix 17
AB8
B
146 164Right-handed alpha
Helix 18
AB9
B
165 171Right-handed 310
Helix 19
AC1
B
172 193Right-handed alpha
Helix 20
AC2
B
194 220Right-handed alpha
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There are 2 sheets in PDB entry 6EP3. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
69 70anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 63first strand
Strand 2
B
67 70anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il