Analysis of interatomic Contacts of Structural Units in PDB entry:
6EQT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EQT entry

There are 2 chains in PDB entry 6EQT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 213
B
 MET 1THR 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6EQT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 16Right-handed alpha
Helix 2
AA2
A
17 29Right-handed alpha
Helix 3
AA3
A
32 38Right-handed alpha
Helix 4
AA4
A
44 60Right-handed alpha
Helix 5
AA5
A
62 76Right-handed alpha
Helix 6
AA6
A
77 81Right-handed 310
Helix 7
AA7
A
100 116Right-handed alpha
Helix 8
AA8
A
171 183Right-handed alpha
Helix 9
AA9
A
197 213Right-handed alpha
Helix 10
AB1
B
2 14Right-handed alpha
Helix 11
AB2
B
17 29Right-handed alpha
Helix 12
AB3
B
32 39Right-handed alpha
Helix 13
AB4
B
44 59Right-handed alpha
Helix 14
AB5
B
62 76Right-handed alpha
Helix 15
AB6
B
77 81Right-handed 310
Helix 16
AB7
B
100 116Right-handed alpha
Helix 17
AB8
B
173 183Right-handed alpha
Helix 18
AB9
B
197 210Right-handed alpha
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There are 2 sheets in PDB entry 6EQT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 126first strand
Strand 2
A
130 137anti-parallel
Strand 3
A
150 155anti-parallel
Strand 4
A
160 164anti-parallel
Strand 5
A
83 89anti-parallel
Strand 6
A
187 195anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 124first strand
Strand 2
B
130 137anti-parallel
Strand 3
B
150 155anti-parallel
Strand 4
B
160 164anti-parallel
Strand 5
B
83 89anti-parallel
Strand 6
B
187 195anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il